RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TRMT10BQ6PF06 316 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 OTOAQ7RTW8 1153 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PCGF5Q86SE9 256 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 HOOK3Q86VS8 718 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 AMIGO1Q86WK6 493 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 C1QL4Q86Z23 238 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 RASGRP3Q8IV61 690 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 APLFQ8IW19 511 aaPredicted RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 TBC1D21Q8IYX1 336 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC22A15Q8IZD6 547 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 RBMXL3Q8N7X1 1067 aaKnown RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 CEP112Q8N8E3 955 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 MNS1Q8NEH6 495 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 OR5K2Q8NHB8 316 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 FLVCR1-AS1Q8TAF5 88 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC41A2Q96JW4 573 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 PTCHD1Q96NR3 888 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 IL17FQ96PD4 163 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 OR2A14Q96R47 310 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SGPP1Q9BX95 441 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 DPH5Q9H2P9 285 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 MVB12BQ9H7P6 319 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 GCM1Q9NP62 436 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLAMF7Q9NQ25 335 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SEMA5BQ9P283 1151 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC17A6Q9P2U8 582 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 CGGBP1Q9UFW8 167 aaPredicted RBP6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 FBXO5Q9UKT4 447 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 HEBP2Q9Y5Z4 205 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 TEX264Q9Y6I9 313 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 POLEQ07864 2286 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 SHANK1Q9Y566 2161 aa6.72□□□□□ -1.33
TRIM53CP-201ENST00000531490 GSAPA4D1B5 854 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 HRKO00198 91 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 SMAD7O15105 426 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 TOX3O15405 576 aaPredicted RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 SPAG6O75602 509 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CBX6O95503 412 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 APOA4P06727 396 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 MSL3P1P0C860 447 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 EBLN1P0CF75 366 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PKMP14618 531 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ST6GAL1P15907 406 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PGAM1P18669 254 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PAMP19021 973 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 OGNP20774 298 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 NDUFS1P28331 727 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PEBP1P30086 187 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CARSP49589 748 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ADARP55265 1226 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 YBX1P67809 324 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 MVKQ03426 396 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 LAPTM5Q13571 262 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CUL1Q13616 776 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 GBX1Q14549 363 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CRYMQ14894 314 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 MORF4L2Q15014 288 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 GPR19Q15760 415 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ZIC1Q15915 447 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 TEDDM1Q5T9Z0 273 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 DUPD1Q68J44 220 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PWWP2BQ6NUJ5 590 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CYP2R1Q6VVX0 501 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CYHR1Q6ZMK1 362 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PRSS42Q7Z5A4 293 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 TRIM73Q86UV7 250 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 OOSP2Q86WS3 158 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 LRRC6Q86X45 466 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CISD2Q8N5K1 135 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 LINC01555Q8NAE3 123 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 SIDT2Q8NBJ9 832 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 SLC38A9Q8NBW4 561 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 RCC1LQ96I51 464 aaKnown RBP6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 TRAPPC9Q96Q05 1148 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ERP44Q9BS26 406 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 MENTQ9BUN1 341 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 NUDT9Q9BW91 350 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ING2Q9H160 280 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 FAM60AQ9NP50 221 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 MLXIPLQ9NP71 852 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 LHX9Q9NQ69 397 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 ASF1BQ9NVP2 202 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 GRHL1Q9NZI5 618 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 GNPTGQ9UJJ9 305 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 PADI1Q9ULC6 663 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 CHMP2BQ9UQN3 213 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 KLHL20Q9Y2M5 609 aa6.71□□□□□ -1.33
TRIM53CP-201ENST00000531490 SPG11Q96JI7 2443 aa6.71□□□□□ -1.34
TRIM53CP-201ENST00000531490 SCN2AQ99250 2005 aa6.71□□□□□ -1.34
TRIM53CP-201ENST00000531490 SCN3AQ9NY46 2000 aa6.71□□□□□ -1.34
TRIM53CP-201ENST00000531490 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 TLCD2A6NGC4 264 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 MATN4O95460 622 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 C1orf105O95561 183 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 TUBBP07437 444 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 CHRM5P08912 532 aaPredicted RBP6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 FGF5P12034 268 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 UGT2B7P16662 529 aa6.7□□□□□ -1.34
TRIM53CP-201ENST00000531490 CDH3P22223 829 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms