RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 CATSPEREQ5SY80 951 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 NIPAL1Q6NVV3 410 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 NXPE4Q6UWF7 544 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 CCDC91Q7Z6B0 441 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 TMPRSS11BQ86T26 416 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 TBC1D1Q86TI0 1168 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-228ENST00000525441 RELL1Q8IUW5 271 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 KLHDC8AQ8IYD2 350 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 SPATA6LQ8N4H0 392 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 CEP112Q8N8E3 955 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 OR11G2Q8NGC1 345 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 OR9A4Q8NGU2 314 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 ZCCHC10Q8TBK6 192 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 IFT81Q8WYA0 676 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 UBXN10Q96LJ8 280 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 FMO2Q99518 471 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 MACROD1Q9BQ69 325 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 CAPS2Q9BXY5 557 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 UNKQ9C0B0 810 aaKnown RBP16.62■□□□□ 0.25
NR1H3-228ENST00000525441 WWOXQ9NZC7 414 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 ZFP69BQ9UJL9 534 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 SLC22A7Q9Y694 548 aa16.62■□□□□ 0.25
NR1H3-228ENST00000525441 PCSK5Q92824 1860 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NCF1BA6NI72 391 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NCF1CA8MVU1 366 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-228ENST00000525441 IDSB3KWA1 339 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 FFAR3O14843 346 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 GPR42O15529 346 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NDUFS4O43181 175 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 H2AFYO75367 372 aaKnown RBP16.61■□□□□ 0.25
NR1H3-228ENST00000525441 HPP00738 406 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 SERPIND1P05546 499 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NCF1P14598 390 aaPredicted RBP16.61■□□□□ 0.25
NR1H3-228ENST00000525441 IL1RNP18510 177 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 GNAZP19086 355 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 SCTRP47872 440 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 CSRP3P50461 194 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 REEP5Q00765 189 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.253e-7■□□□□ 9.7
NR1H3-228ENST00000525441 HERC3Q15034 1050 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 SULT1C3Q6IMI6 304 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 KCT2Q8NC54 265 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 TM9SF4Q92544 642 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 KIAA1191Q96A73 305 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NMRAL1Q9HBL8 299 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 NINJ2Q9NZG7 142 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 CD274Q9NZQ7 290 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 RNF112Q9ULX5 631 aa16.61■□□□□ 0.25
NR1H3-228ENST00000525441 URADA6NGE7 173 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 CYC1P08574 325 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 SLC35E2BP0CK96 405 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 SLC6A12P48065 614 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 MAT1AQ00266 395 aaKnown RBP16.6■□□□□ 0.25
NR1H3-228ENST00000525441 KCNC4Q03721 635 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 CDC16Q13042 620 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 OR4D1Q15615 310 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 SYT16Q17RD7 645 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 ATG9BQ674R7 924 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 CMC1Q7Z7K0 106 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 LAPTM4BQ86VI4 370 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 ZC3H7AQ8IWR0 971 aaKnown RBP16.6■□□□□ 0.25
NR1H3-228ENST00000525441 ZNF740Q8NDX6 193 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 TRPV3Q8NET8 790 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 STAG3L4Q8TBR4 150 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 NT5CQ8TCD5 201 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 ACSS3Q9H6R3 686 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 GPRC5BQ9NZH0 403 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 ACOT9Q9Y305 439 aa16.6■□□□□ 0.25
NR1H3-228ENST00000525441 PYCARD-AS1I3L0S3 204 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 SGK494L7N484 410 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 KLHL18O94889 574 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 BMP10O95393 424 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 LTA4HP09960 611 aaKnown RBP16.59■□□□□ 0.25
NR1H3-228ENST00000525441 C1GALT1C1LP0DN25 315 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 GGT5P36269 586 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 GDF5P43026 501 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 RBBP5Q15291 538 aaKnown RBP16.59■□□□□ 0.25
NR1H3-228ENST00000525441 UAP1Q16222 522 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-228ENST00000525441 COLEC12Q5KU26 742 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 MROH9Q5TGP6 573 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 ABHD13Q7L211 337 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 NDUFAF7Q7L592 441 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 PRSS41Q7RTY9 318 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 PARP9Q8IXQ6 854 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 KRT78Q8N1N4 520 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 PDPRQ8NCN5 879 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 TTLQ8NG68 377 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 OR51Q1Q8NH59 317 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 METTL21AQ8WXB1 218 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 MRRFQ96E11 262 aaKnown RBP16.59■□□□□ 0.25
NR1H3-228ENST00000525441 LHPPQ9H008 270 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 SPNS1Q9H2V7 528 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 ALG9Q9H6U8 611 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 ZNF552Q9H707 407 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-228ENST00000525441 DNAJC11Q9NVH1 559 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 HCN3Q9P1Z3 774 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 MKL2Q9ULH7 1088 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 NAALAD2Q9Y3Q0 740 aa16.59■□□□□ 0.25
NR1H3-228ENST00000525441 TNRC6AQ8NDV7 1962 aaKnown RBP16.58■□□□□ 0.25
NR1H3-228ENST00000525441 A0A087X1B8 175 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms