RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 FEZF1A0PJY2 475 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 CXCR6O00574 342 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 LYNP07948 512 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 HOXB9P17482 250 aaPredicted RBP14.67□□□□□ -0.06
BEST1-204ENST00000524926 CXCR2P25025 360 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 HSPA13P48723 471 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 CCR8P51685 355 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 PDK3Q15120 406 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 UAP1L1Q3KQV9 507 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 FBXO43Q4G163 708 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 VN1R5Q7Z5H4 357 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 PGBD3Q8N328 593 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 FBXO30Q8TB52 745 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 HMGB4Q8WW32 186 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 ASB12Q8WXK4 309 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 CENPNQ96H22 339 aaPredicted RBP14.67□□□□□ -0.06
BEST1-204ENST00000524926 PELI2Q9HAT8 420 aa14.67□□□□□ -0.06
BEST1-204ENST00000524926 NDRG2Q9UN36 371 aaKnown RBP14.67□□□□□ -0.06
BEST1-204ENST00000524926 CLIC1O00299 241 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 DENRO43583 198 aaKnown RBP14.66□□□□□ -0.06
BEST1-204ENST00000524926 RAB28P51157 221 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 TFF2Q03403 129 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 ADCK2Q7Z695 626 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 METTL4Q8N3J2 472 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 PAPD5Q8NDF8 572 aaKnown RBP14.66□□□□□ -0.06
BEST1-204ENST00000524926 MMP17Q9ULZ9 603 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 ERVK-11Q9UQG0 969 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 PRAMEF33A0A0G2JMD5 474 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 C7orf72A4D263 438 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 LRRC72A6NJI9 287 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 FAM220BPB1ANY3 271 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 SOCS2O14508 198 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 EPN2O95208 641 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 C1QCP02747 245 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 COL4A2P08572 1712 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 ENGP17813 658 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 GABRG2P18507 467 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 ABHD18Q0P651 414 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 SLC14A1Q13336 389 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 CCINQ13939 588 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 FAM98BQ52LJ0 330 aaKnown RBP14.66□□□□□ -0.06
BEST1-204ENST00000524926 ABHD11Q8NFV4 315 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 PDXPQ96GD0 296 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 CNBD2Q96M20 576 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 OR2M4Q96R27 311 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 SIRT5Q9NXA8 310 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 TSC22D4Q9Y3Q8 395 aa14.66□□□□□ -0.06
BEST1-204ENST00000524926 PDLIM1O00151 329 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 SCELO95171 688 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 HNRNPA2B1P22626 353 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 HTR1BP28222 390 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CCT8P50990 548 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 GZMMP51124 257 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 TAS2R50P59544 299 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 MC1RQ01726 317 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CHRNB3Q05901 458 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 C2orf80Q0P641 193 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 ANXA8L1Q5VT79 327 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 LPCAT2Q7L5N7 544 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CALHM3Q86XJ0 350 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 ANKRD53Q8N9V6 530 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 OR52E1Q8NGJ3 308 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 C16orf78Q8WTQ4 265 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 OR1E3Q8WZA6 343 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 COQ8BQ96D53 544 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 SCARF2Q96GP6 870 aaPredicted RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 BMFQ96LC9 184 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 SORBS1Q9BX66 1292 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 REEP4Q9H6H4 257 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 WASH6PQ9NQA3 447 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 AHSPQ9NZD4 102 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 SPASTQ9UBP0 616 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 EXO1Q9UQ84 846 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 RNF103-CHMP3A0A140T963 221 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 ARHGAP10A1A4S6 786 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 MBTPS2O43462 519 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CREG1O75629 220 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 LDLRP01130 860 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 POU3F3P20264 500 aaPredicted RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 HNRNPFP52597 415 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 KIAA1024LP59773 190 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 NFATC4Q14934 902 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CCDC85BQ15834 202 aaPredicted RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 RPE65Q16518 533 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CAMKMTQ7Z624 323 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 TRIM69Q86WT6 500 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 PNPT1Q8TCS8 783 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 TSACCQ96A04 125 aaPredicted RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 REXO5Q96IC2 774 aaKnown RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 ZNF597Q96LX8 424 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 UGT2B28Q9BY64 529 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 MVB12BQ9H7P6 319 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 SCHIP1Q9P0W5 487 aaPredicted RBP14.65□□□□□ -0.06
BEST1-204ENST00000524926 OAZ3Q9UMX2 235 aa14.65□□□□□ -0.06
BEST1-204ENST00000524926 TNRC18O15417 2968 aaPredicted RBP14.64□□□□□ -0.07
BEST1-204ENST00000524926 PRR19A6NJB7 356 aa14.64□□□□□ -0.07
BEST1-204ENST00000524926 VGLL3A8MV65 326 aa14.64□□□□□ -0.07
BEST1-204ENST00000524926 H0YJX3 145 aa14.64□□□□□ -0.07
BEST1-204ENST00000524926 OR1F1O43749 312 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms