RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 DDIASQ8IXT1 998 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 CMTM8Q8IZV2 173 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 RBFAQ8N0V3 343 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 STK40Q8N2I9 435 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 BBS5Q8N3I7 341 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 ZBTB2Q8N680 514 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 OR2AP1Q8NGE2 309 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 GABPB2Q8TAK5 448 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 ADAMTS17Q8TE56 1095 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 GTF2H4Q92759 462 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 TUBGCP3Q96CW5 907 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 NUDT11Q96G61 164 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 C16orf92Q96LL3 132 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 ZNF583Q96ND8 569 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 CIB1Q99828 191 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 HOPXQ9BPY8 73 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 NTMT1Q9BV86 223 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 ADGRE3Q9BY15 652 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 ACPTQ9BZG2 426 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 TRIM4Q9C037 500 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 CIPCQ9C0C6 399 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 PAIP1Q9H074 479 aaKnown RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 SEMA6AQ9H2E6 1030 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 MUC13Q9H3R2 512 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 CLMPQ9H6B4 373 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 NOL11Q9H8H0 719 aaKnown RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 NANOGQ9H9S0 305 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 IL1RL2Q9HB29 575 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 EMC7Q9NPA0 242 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 SPATS2LQ9NUQ6 558 aaKnown RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 MRGBPQ9NV56 204 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 SPG21Q9NZD8 308 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 VAPAQ9P0L0 249 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 EPS15L1Q9UBC2 864 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 TRPS1Q9UHF7 1281 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 FBXO10Q9UK96 956 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 PDE10AQ9Y233 779 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 MAN2B2Q9Y2E5 1009 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 DLGAP4Q9Y2H0 992 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 POLR3HQ9Y535 204 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-212ENST00000519622 TRIM17Q9Y577 477 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 SNX13Q9Y5W8 968 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 CEPT1Q9Y6K0 416 aa4.38□□□□□ -1.71
PABPC1-212ENST00000519622 GLYATL1P3A0A0U1RQE8 302 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 C1orf232A0A0U1RR37 186 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 FAM149AA5PLN7 773 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 ANTXRLA6NF34 631 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 ENO4A6NNW6 628 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 HIDE1A8MVS5 230 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 H0Y626 953 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GFYI3L273 518 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 K7EPI3 171 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 PDLIM1O00151 329 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 EIF3FO00303 357 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-212ENST00000519622 YY2O15391 372 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SNX2O60749 519 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GPC4O75487 556 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SLC22A3O75751 556 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 FGF18O76093 207 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 WDR47O94967 919 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SLC25A14O95258 325 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-212ENST00000519622 RASAL1O95294 804 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 PGM3O95394 542 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 KNG1P01042 644 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 URODP06132 367 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GPIP06744 558 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 CLTBP09497 229 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 CISD3P0C7P0 127 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 ETS2P15036 469 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 ZNF23P17027 643 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 NELFEP18615 380 aaKnown RBP4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SDC1P18827 310 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GGT1P19440 569 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SLC5A2P31639 672 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SHMT2P34897 504 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GRIA3P42263 894 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 CDKN2CP42773 168 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 PIK3CGP48736 1102 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SPINT3P49223 89 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 METAP1P53582 386 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 C21orf58P58505 322 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 MTPNP58546 118 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 DCDC1P59894 354 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 STX1BP61266 288 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 HMGCS1Q01581 520 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 ALDH6A1Q02252 535 aaKnown RBP4.37□□□□□ -1.71
PABPC1-212ENST00000519622 MTAPQ13126 283 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 NFYCQ13952 458 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 PTGR1Q14914 329 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 VEPH1Q14D04 833 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 RBBP7Q16576 425 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 NRF1Q16656 503 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 SLC36A3Q495N2 470 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 GPR33Q49SQ1 333 aa4.37□□□□□ -1.71
PABPC1-212ENST00000519622 CCSMST1Q4G0I0 132 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms