RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CITED4Q96RK1 184 aa10.7□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF471Q9BX82 626 aaPredicted RBP10.7□□□□□ -0.7
TRIM41-209ENST00000515834 KCNK13Q9HB14 408 aa10.7□□□□□ -0.7
TRIM41-209ENST00000515834 C8orf4Q9NR00 106 aa10.7□□□□□ -0.7
TRIM41-209ENST00000515834 SCML2Q9UQR0 700 aa10.7□□□□□ -0.7
TRIM41-209ENST00000515834 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 OGDHQ02218 1023 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 PMS2P3Q13401 168 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 LAS2Q8IYD9 372 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TXNDC5Q8NBS9 432 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 OR2L2Q8NH16 312 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TMEM203Q969S6 136 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 S100A14Q9HCY8 104 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 POFUT2Q9Y2G5 429 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ROBO3Q96MS0 1386 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 EDF1O60869 148 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TNFRSF8P28908 595 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF280AP59817 542 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 BDH1Q02338 343 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZC3H14Q6PJT7 736 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 MTMR14Q8NCE2 650 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 RBP7Q96R05 134 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 POLR2J2Q9GZM3 115 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SP140LQ9H930 580 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 APOBEC3BQ9UH17 382 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 CNTN6Q9UQ52 1028 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 PCDHB14Q9Y5E9 798 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 AGLP35573 1532 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 GABRDO14764 452 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SASH3O75995 380 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 KDM4BO94953 1096 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SPARCP09486 303 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF30P17039 623 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 GDF5P43026 501 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 RPL5P46777 297 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 IDH3AP50213 366 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 XIAPP98170 497 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 IRF5Q13568 498 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FRG2Q64ET8 278 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 CPNE2Q96FN4 548 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TMEM41AQ96HV5 264 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FRG2BQ96QU4 278 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FUCA2Q9BTY2 467 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF700Q9H0M5 742 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SMCO3A2RU48 225 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FAM170BA6NMN3 283 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 HCRTO43612 131 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 LEFTY1O75610 366 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SIX3O95343 332 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 PLGLAQ15195 96 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FUKQ8N0W3 1084 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 PGAM4Q8N0Y7 254 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 OR4C15Q8NGM1 316 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 KCTD13Q8WZ19 329 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 MSLNLQ96KJ4 702 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TTYH1Q9H313 450 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ACTL8Q9H568 366 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 C13orf42A0A1B0GVH6 325 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FABP12A6NFH5 140 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 PAX7P23759 505 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FAM214AQ32MH5 1076 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 IQCCQ4KMZ1 466 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 FLYWCH1Q4VC44 716 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 ZNF852Q6ZMS4 543 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TDRPQ86YL5 185 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 SVOPLQ8N434 492 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 LENG8Q96PV6 779 aaPredicted RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 OR2M4Q96R27 311 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TUBGCP5Q96RT8 1024 aa10.69□□□□□ -0.7
TRIM41-209ENST00000515834 TFB2MQ9H5Q4 396 aaKnown RBP10.69□□□□□ -0.7
TRIM41-209ENST00000515834 CLIC1O00299 241 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 PFKLP17858 780 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 PRPS1L1P21108 318 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 LASP1Q14847 261 aaKnown RBP10.68□□□□□ -0.7
TRIM41-209ENST00000515834 CLDN19Q8N6F1 224 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 CDKN2AIPNLQ96HQ2 116 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 THUMPD1Q9NXG2 353 aaKnown RBP10.68□□□□□ -0.7
TRIM41-209ENST00000515834 TNFRSF10DQ9UBN6 386 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 EIF3KQ9UBQ5 218 aaKnown RBP10.68□□□□□ -0.7
TRIM41-209ENST00000515834 SUSD2Q9UGT4 822 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 EFCAB9A8MZ26 197 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 DNAJA2O60884 412 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 PVALBP20472 110 aaPredicted RBP10.68□□□□□ -0.7
TRIM41-209ENST00000515834 GLP1RP43220 463 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 GDF10P55107 478 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 TMEM35AQ53FP2 167 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 SMYD5Q6GMV2 418 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 TMIGD1Q6UXZ0 262 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 ERN2Q76MJ5 926 aaKnown RBP10.68□□□□□ -0.7
TRIM41-209ENST00000515834 OR8K3Q8NH51 312 aa10.68□□□□□ -0.7
TRIM41-209ENST00000515834 SPOCK2Q92563 424 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms