RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NBASA2RRP1 2371 aa12.6□□□□□ -0.39
RNF4-215ENST00000511843 UBR5O95071 2799 aaPredicted RBP12.6□□□□□ -0.39
RNF4-215ENST00000511843 TRBC2A0A5B9 178 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 TTLL8A6PVC2 850 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 MAP2K7O14733 419 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 PRPF4O43172 522 aaKnown RBP eCLIP12.59□□□□□ -0.39
RNF4-215ENST00000511843 NDUFS4O43181 175 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 DNAJB6O75190 326 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 WDR47O94967 919 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 ACPPP15309 386 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 CD1DP15813 335 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 STX2P32856 288 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 GRK3P35626 688 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 AVPR1BP47901 424 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 EMP2P54851 167 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 DLG1Q12959 904 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
RNF4-215ENST00000511843 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 FAM53BQ14153 422 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 NDUFA9Q16795 377 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 SLC6A19Q695T7 634 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 JMJD6Q6NYC1 403 aaPredicted RBP12.59□□□□□ -0.39
RNF4-215ENST00000511843 ADAMTSL2Q86TH1 951 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 MMGT1Q8N4V1 131 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 ANKRD53Q8N9V6 530 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 CAMKVQ8NCB2 501 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 OR4K1Q8NGD4 311 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 OR5T3Q8NGG3 340 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 RHBDF1Q96CC6 855 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 THAP11Q96EK4 314 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 TSPAN17Q96FV3 270 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 TMEM79Q9BSE2 394 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 DERL2Q9GZP9 239 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 MKKSQ9NPJ1 570 aaPredicted RBP12.59□□□□□ -0.39
RNF4-215ENST00000511843 MKL2Q9ULH7 1088 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 DYRK1BQ9Y463 629 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 CSAG2Q9Y5P2 127 aa12.59□□□□□ -0.39
RNF4-215ENST00000511843 PRRC2CQ9Y520 2896 aaKnown RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 TAPBPO15533 448 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 DPM1O60762 260 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 KLHL18O94889 574 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 NSA2O95478 260 aaKnown RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 IGHEP01854 428 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 HEXBP07686 556 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 CELA2AP08217 269 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 COX6A1P12074 109 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 SPRP35270 261 aaPredicted RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 HNF4AP41235 474 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 KCNC1P48547 511 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 RAB10P61026 200 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 OLR1P78380 273 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 CDKL1Q00532 357 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 REEP5Q00765 189 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 TGFBIQ15582 683 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 GRTP1Q5TC63 336 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 MFSD4BQ5TF39 518 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 ATG9BQ674R7 924 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 CYS1Q717R9 158 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 Q8NA96 180 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 IFT81Q8WYA0 676 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 THOC3Q96J01 351 aaKnown RBP12.58□□□□□ -0.4
RNF4-215ENST00000511843 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 C14orf105Q9NVL8 296 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 NINJ2Q9NZG7 142 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 ASB1Q9Y576 335 aa12.58□□□□□ -0.4
RNF4-215ENST00000511843 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 IGHV3-20A0A0C4DH32 117 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 C4orf51C9J302 202 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 H0YIG0 161 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 CDC123O75794 336 aaPredicted RBP12.57□□□□□ -0.4
RNF4-215ENST00000511843 SORBS2O94875 1100 aaKnown RBP12.57□□□□□ -0.4
RNF4-215ENST00000511843 BMP10O95393 424 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 HPP00738 406 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 ZNF888P0CJ79 500 aaPredicted RBP12.57□□□□□ -0.4
RNF4-215ENST00000511843 SLC35E2BP0CK96 405 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 XCR1P46094 333 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 SCTRP47872 440 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 SLC6A12P48065 614 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 HSPA7P48741 367 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 IRF9Q00978 393 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 RBBP5Q15291 538 aaKnown RBP12.57□□□□□ -0.4
RNF4-215ENST00000511843 PLEKHN1Q494U1 663 aaPredicted RBP12.57□□□□□ -0.4
RNF4-215ENST00000511843 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 MROH9Q5TGP6 573 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 NXPE4Q6UWF7 544 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 LANCL3Q6ZV70 420 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 RAPH1Q70E73 1250 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 GPSM1Q86YR5 675 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 OR51Q1Q8NH59 317 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 NACC2Q96BF6 587 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 PEX11GQ96HA9 241 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 UBXN10Q96LJ8 280 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 TGIF2Q9GZN2 237 aa12.57□□□□□ -0.4
RNF4-215ENST00000511843 VN1R1Q9GZP7 353 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms