RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MAU2Q9Y6X3 613 aa8.34□□□□□ -1.07
PDLIM5-213ENST00000509357 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 TLDC2A0PJX2 215 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 G3V2L1 256 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 K7EM74 188 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 MAP2K7O14733 419 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 DSCR3O14972 297 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 KLF7O75840 302 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 KRT38O76015 456 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 IGHEP01854 428 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ENO2P09104 434 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CDH1P12830 882 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CNTFP26441 200 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 VARSP26640 1264 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 GGT5P36269 586 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC26A3P40879 764 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CASRP41180 1078 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 OR1D4P47884 311 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 AP1S2P56377 157 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 FOXL2P58012 376 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ATP6V0D1P61421 351 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CSNK1G2P78368 415 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ABATP80404 500 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 OCA2Q04671 838 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 PRDX1Q06830 199 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 MUM1Q2TAK8 710 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 PRAMEF13Q5VWM6 474 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF385CQ66K41 422 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 RNF44Q7L0R7 432 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 VN1R4Q7Z5H5 301 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ADAMTSL2Q86TH1 951 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 TBC1D1Q86TI0 1168 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 GPSM1Q86YR5 675 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CSNK1A1LQ8N752 337 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 OR2Y1Q8NGV0 311 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ADAMTS17Q8TE56 1095 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 UBTD2Q8WUN7 234 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 NEIL2Q969S2 332 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 TSNARE1Q96NA8 513 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF285Q96NJ3 590 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 MACROD1Q9BQ69 325 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 PLCD4Q9BRC7 762 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 TRIM54Q9BYV2 358 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 EPN3Q9H201 632 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CLMPQ9H6B4 373 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZBTB26Q9HCK0 441 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF304Q9HCX3 659 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CCDC177Q9NQR7 707 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 SCN3AQ9NY46 2000 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 CPSF2Q9P2I0 782 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ANKMY1Q9P2S6 941 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC17A7Q9P2U7 560 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF225Q9UK10 706 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 SLC22A14Q9Y267 594 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 MRPS2Q9Y399 296 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 ZNF451Q9Y4E5 1061 aa8.33□□□□□ -1.08
PDLIM5-213ENST00000509357 IQANK1A0A1B0GTG1 560 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 FEZF1A0PJY2 475 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 TTLL8A6PVC2 850 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 A8MT66 165 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SUPT3HB4E1H0 165 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 H0YGG7 62 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 H7BY64 318 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 TXNDC9O14530 226 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 TYROBPO43914 113 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 DLX3O60479 287 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 CDH16O75309 829 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SPAG7O75391 227 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SUPT3HO75486 399 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 PROCP04070 461 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ANXA5P08758 320 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 FBLP22087 321 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ARRB2P32121 409 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 BCL6P41182 706 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 EFNA3P52797 238 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ARF3P61204 181 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 CASP8Q14790 479 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SETDB1Q15047 1291 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ACAP2Q15057 778 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 RBBP7Q16576 425 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 IRAK1BP1Q5VVH5 260 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 PRMT9Q6P2P2 845 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 LCTLQ6UWM7 567 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 SHISA6Q6ZSJ9 500 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 OVCH1Q7RTY7 1134 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 MRGPREQ86SM8 312 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 EXOC3L1Q86VI1 746 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 THOC6Q86W42 341 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 PRSS58Q8IYP2 241 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 RNF175Q8N4F7 328 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 BANPQ8N9N5 519 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ANKRD53Q8N9V6 530 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 OR4K1Q8NGD4 311 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 RHEBL1Q8TAI7 183 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 FKBP10Q96AY3 582 aa8.32□□□□□ -1.08
PDLIM5-213ENST00000509357 ARL8AQ96BM9 186 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms