RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PPP1R36Q96LQ0 422 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TUBB2BQ9BVA1 445 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PCED1AQ9H1Q7 454 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 UVRAGQ9P2Y5 699 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CA14Q9ULX7 337 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SLC6A14Q9UN76 642 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SLC5A6Q9Y289 635 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SIT1Q9Y3P8 196 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF541Q9H0D2 1346 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 BLOC1S5-TXNDC5H3BN57 136 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TO15178 435 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SIGLEC6O43699 453 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LYPLA2O95372 231 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ANPEPP15144 967 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 RAB4AP20338 218 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AVPR1AP37288 418 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 JAK3P52333 1124 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ECT2LQ008S8 904 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SPP2Q13103 211 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 BMT2Q1RMZ1 405 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MTX3Q5HYI7 312 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TRIQKQ629K1 86 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DHRS7BQ6IAN0 325 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 BRAT1Q6PJG6 821 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DEFB132Q7Z7B7 95 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 VSIG10LQ86VR7 867 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CCDC71Q8IV32 467 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 FAM58AQ8N1B3 248 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SIRT6Q8N6T7 355 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DDHD1Q8NEL9 900 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LARP4BQ92615 738 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DGCR6LQ9BY27 220 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SLC39A8Q9C0K1 460 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 EURLQ9NYK6 297 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LRWD1Q9UFC0 647 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MGAT4AQ9UM21 535 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GSTK1Q9Y2Q3 226 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GRIP1Q9Y3R0 1128 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CHTOPQ9Y3Y2 248 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PCDHB1Q9Y5F3 818 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MYH11P35749 1972 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 THSD7BQ9C0I4 1608 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SEC14L5O43304 696 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KLRC4O43908 158 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GLCEO94923 617 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KRT75O95678 551 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PRPS2P11908 318 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CDC25AP30304 524 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 QARSP47897 775 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PRELPP51888 382 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ARG2P78540 354 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LACTBP83111 547 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 FOXM1Q08050 763 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TCP10Q12799 353 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 EMC2Q15006 297 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 FAM153CQ494X1 144 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GPR33Q49SQ1 333 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SLC9C1Q4G0N8 1177 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HIKESHIQ53FT3 197 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AGKQ53H12 422 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 EXOSC6Q5RKV6 272 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PRAMEF17Q5VTA0 474 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TRMT10BQ6PF06 316 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CENPUQ71F23 418 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC8AQ8IWT6 810 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AQP12AQ8IXF9 295 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MRPL41Q8IXM3 137 aaKnown RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF655Q8N720 491 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 TEX47Q8TBZ9 253 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC15Q8TF66 581 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 KBTBD7Q8WVZ9 684 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ASB11Q8WXH4 323 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MYDGFQ969H8 173 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 LENG8Q96PV6 779 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AGAP2Q99490 1192 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 OR51V1Q9H2C8 321 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HIPK3Q9H422 1215 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PNPLA3Q9NST1 481 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 POT1Q9NUX5 634 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 A0A1B0GTQ1 180 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 A0A1W2PRX2 142 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 UBE2Q2LH0YL09 131 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 AP4M1O00189 453 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MGAMO43451 1857 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 SSNA1O43805 119 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 CPNE6O95741 557 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 URODP06132 367 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HOXC6P09630 235 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 ARSAP15289 507 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HOXD10P28358 340 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 PBX1P40424 430 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MAGEA12P43365 314 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 GNPDA1P46926 289 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 VAV2P52735 878 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 MLF1P58340 268 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 HSD11B2P80365 405 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 NIPAL4Q0D2K0 466 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 NFATC3Q12968 1075 aa3.79□□□□□ -1.8
NEDD4-209ENST00000508871 DMP1Q13316 513 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms