RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PALM2Q8IXS6 379 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 ABHD11Q8NFV4 315 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 GABPB2Q8TAK5 448 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 ZCCHC10Q8TBK6 192 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 PWWP2AQ96N64 755 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 OR4K3Q96R72 315 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 OLFM1Q99784 485 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 RNF32Q9H0A6 362 aa12.29□□□□□ -0.44
HMGCS1-205ENST00000508319 CREBBPQ92793 2442 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 OR2W5A6NFC9 320 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ZSCAN12O43309 604 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 RDH16O75452 317 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 WFS1O76024 890 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 UQCRHP07919 91 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ICAM2P13598 275 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 NPPBP16860 134 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 TCP1P17987 556 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ELK3P41970 407 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 AP1S2P56377 157 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 AP2B1P63010 937 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 MORF4L2Q15014 288 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 MFSD4BQ5TF39 518 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 HECTD2Q5U5R9 776 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 STEAP4Q687X5 459 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 HIBCHQ6NVY1 386 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 TRMT10BQ6PF06 316 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 GPATCH11Q8N954 259 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 MFSD9Q8NBP5 474 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CAMKVQ8NCB2 501 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 OR56A3Q8NH54 315 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 SLC13A3Q8WWT9 602 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 METTL21AQ8WXB1 218 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 NR4A3Q92570 626 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 PYCR2Q96C36 320 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 MAGEB10Q96LZ2 347 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CYTH2Q99418 400 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 SARGQ9BW04 601 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ANKHQ9HCJ1 492 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 TRMT1Q9NXH9 659 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ARL15Q9NXU5 204 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 IKZF3Q9UKT9 509 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CORO1CQ9ULV4 474 aaPredicted RBP12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 CHMP2BQ9UQN3 213 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 OSGIN2Q9Y236 505 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 TEX264Q9Y6I9 313 aa12.28□□□□□ -0.44
HMGCS1-205ENST00000508319 ZNF860A6NHJ4 632 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 TP73O15350 636 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 NDUFS4O43181 175 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 LRRTM2O43300 516 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 STSP08842 583 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HIST1H2AGP0C0S8 130 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HIST1H2ADP20671 130 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 GRK3P35626 688 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 DCTP40126 519 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 IL2P60568 153 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 MEF2AQ02078 507 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF33BQ06732 778 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HP1BP3Q5SSJ5 553 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 DUPD1Q68J44 220 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 PLAG1Q6DJT9 500 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 SBSNQ6UWP8 590 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 ANKRD37Q7Z713 158 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 PDIK1LQ8N165 341 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 AFAP1L2Q8N4X5 818 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF740Q8NDX6 193 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 OR4K1Q8NGD4 311 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 OR5T3Q8NGG3 340 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 MOCOSQ96EN8 888 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 SNF8Q96H20 258 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HIST1H2AHQ96KK5 128 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HIST1H2AJQ99878 128 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 HAUS8Q9BT25 410 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 H2AFJQ9BTM1 129 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 RBCK1Q9BYM8 510 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 PPANQ9NQ55 473 aaKnown RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 C19orf25Q9UFG5 118 aaPredicted RBP12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 NAALAD2Q9Y3Q0 740 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 SLC22A7Q9Y694 548 aa12.27□□□□□ -0.45
HMGCS1-205ENST00000508319 MYO7BQ6PIF6 2116 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 OR5H15A6NDH6 313 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 USP27XA6NNY8 438 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 CDC123O75794 336 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 ZNF37AP17032 561 aaPredicted RBP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 AGTR2P50052 363 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 CCR8P51685 355 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 KCNK10P57789 538 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 RHAGQ02094 409 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 FRG1Q14331 258 aaKnown RBP12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 PPP1R3AQ16821 1122 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 BTBD16Q32M84 506 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 CATSPEREQ5SY80 951 aa12.26□□□□□ -0.45
HMGCS1-205ENST00000508319 ABHD17BQ5VST6 288 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms