RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 EURLQ9NYK6 297 aa8.77□□□□□ -1.01
UBE2D3-223ENST00000508249 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-223ENST00000508249 RUVBL2Q9Y230 463 aaKnown RBP8.77□□□□□ -1.01
UBE2D3-223ENST00000508249 PADI2Q9Y2J8 665 aa8.77□□□□□ -1.01
UBE2D3-223ENST00000508249 PSAT1Q9Y617 370 aa8.77□□□□□ -1.01
UBE2D3-223ENST00000508249 OR2A25A4D2G3 310 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 C9J4A7 227 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ZSCAN9O15535 394 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 C1QAP02745 245 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ANXA5P08758 320 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ABHD2P08910 425 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 PVRP15151 417 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 EZRP15311 586 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ITGAXP20702 1163 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 CNTFP26441 200 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 GRIA3P42263 894 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 CA7P43166 264 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 GABRA4P48169 554 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SERPINB9P50453 376 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 RAB10P61026 200 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 Q0VFX4 171 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 CDC16Q13042 620 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 USP10Q14694 798 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SSPNQ14714 243 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 GRM7Q14831 915 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 FAM214AQ32MH5 1076 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 KBTBD12Q3ZCT8 623 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 CCSMST1Q4G0I0 132 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 THEMIS2Q5TEJ8 643 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 PRAMEF13Q5VWM6 474 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 MRPL14Q6P1L8 145 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 LCTLQ6UWM7 567 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 FRA10AC1Q70Z53 315 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 RNF44Q7L0R7 432 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TRMT10CQ7L0Y3 403 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TAX1BP1Q86VP1 789 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 MCATQ8IVS2 390 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 LRRC56Q8IYG6 542 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TBC1D19Q8N5T2 526 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 PPM1NQ8N819 430 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 OR2Y1Q8NGV0 311 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 IFT81Q8WYA0 676 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TM9SF4Q92544 642 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 FBXL8Q96CD0 374 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 CLIP3Q96DZ5 547 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 FER1L6-AS2Q96M78 137 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 IP6K3Q96PC2 410 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 GBP5Q96PP8 586 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 OLFM1Q99784 485 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ZFYVE21Q9BQ24 234 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SELENOSQ9BQE4 189 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 PLCD4Q9BRC7 762 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 MESP1Q9BRJ9 268 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 NDC1Q9BTX1 674 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 ACSS3Q9H6R3 686 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SLC6A20Q9NP91 592 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SMYD2Q9NRG4 433 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SLC22A11Q9NSA0 550 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TXLNGQ9NUQ3 528 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 OLAHQ9NV23 265 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 IRAK4Q9NWZ3 460 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 STOX2Q9P2F5 926 aaPredicted RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 SLC17A6Q9P2U8 582 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 PDE10AQ9Y233 779 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 OARD1Q9Y530 152 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 IKBKGQ9Y6K9 419 aa8.76□□□□□ -1.01
UBE2D3-223ENST00000508249 FN1P02751 2386 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 FITM1A5D6W6 292 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 PRPF4O43172 522 aaKnown RBP eCLIP8.75□□□□□ -1.013e-7■■□□□ 13.1
UBE2D3-223ENST00000508249 ZNF749O43361 778 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 ZNF500O60304 480 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 F7P08709 466 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 CAPN3P20807 821 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 SAT1P21673 171 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 MST1P26927 711 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 GRK3P35626 688 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 TBPL1P62380 186 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 SRSF11Q05519 484 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 TRADDQ15628 312 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 ZIC1Q15915 447 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 LGSNQ5TDP6 509 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 GARNL3Q5VVW2 1013 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 FCRL6Q6DN72 434 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 ZNF425Q6IV72 752 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 RPUSD3Q6P087 351 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 AGTRAPQ6RW13 159 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 TBC1D1Q86TI0 1168 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 C17orf64Q86WR6 236 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 ZNF655Q8N720 491 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 CATSPER1Q8NEC5 780 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 OR56A3Q8NH54 315 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 NR4A3Q92570 626 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 MVB12AQ96EY5 273 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 DPH7Q9BTV6 452 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 SGPP1Q9BX95 441 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 CAPS2Q9BXY5 557 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 CDC42EP4Q9H3Q1 356 aaKnown RBP8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 MCCC2Q9HCC0 563 aa8.75□□□□□ -1.01
UBE2D3-223ENST00000508249 FAM60AQ9NP50 221 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms