RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 HEATR5BQ9P2D3 2071 aa19.85■□□□□ 0.77
SQSTM1-210ENST00000506042 ABCA12Q86UK0 2595 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 URADA6NGE7 173 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 P2RX6O15547 441 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 IL1RNP18510 177 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TBPL1P62380 186 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 GPS1Q13098 491 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TUBA3CQ13748 450 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 ABRAXAS2Q15018 415 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 CAPN13Q6MZZ7 669 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TMEM214Q6NUQ4 689 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TUBA3EQ6PEY2 450 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 PAPD4Q6PIY7 484 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 PLD3Q8IV08 490 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 TMEM139Q8IV31 216 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 ARMC2Q8NEN0 867 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 SLC13A3Q8WWT9 602 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 KLHL1Q9NR64 748 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 MAD1L1Q9Y6D9 718 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 MYO7BQ6PIF6 2116 aa19.84■□□□□ 0.77
SQSTM1-210ENST00000506042 MAGEB17A8MXT2 336 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 FCHO1O14526 889 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 FANCGO15287 622 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 CEP104O60308 925 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 SNRPB2P08579 225 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 IMPA1P29218 277 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 OR4D2P58180 307 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 RGS1Q08116 209 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 CUL1Q13616 776 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 SFT2D3Q587I9 215 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 LANCL3Q6ZV70 420 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 CRLF3Q8IUI8 442 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 ARHGEF39Q8N4T4 335 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 POGLUT1Q8NBL1 392 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 ZCCHC10Q8TBK6 192 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 NAP1L3Q99457 506 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 GPR21Q99679 349 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 C20orf96Q9NUD7 363 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 TAS2R13Q9NYV9 303 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 LRFN1Q9P244 771 aa19.83■□□□□ 0.77
SQSTM1-210ENST00000506042 GABRR3A8MPY1 467 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 NDC80O14777 642 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC16A5O15375 505 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 CCDC175P0C221 793 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 ZNF24P17028 368 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 GRNP28799 593 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 MPP1Q00013 466 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 PMP22Q01453 160 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 SLC25A25Q6KCM7 469 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 Q6ZPB1 254 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 ABHD13Q7L211 337 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 CEP97Q8IW35 865 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 MDS2Q8NDY4 140 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 PLPP5Q8NEB5 264 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 CA5BP1Q8WTZ4 195 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 PHF10Q8WUB8 498 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 ATL1Q8WXF7 558 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 SCMH1Q96GD3 660 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 CLK4Q9HAZ1 481 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 PARVBQ9HBI1 364 aa19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 FBXO6Q9NRD1 293 aaPredicted RBP19.82■□□□□ 0.76
SQSTM1-210ENST00000506042 IGHV3-20A0A0C4DH32 117 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 ASPDHA6ND91 283 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 NPIPA5E9PKD4 350 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 SGK494L7N484 410 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 PSMD12O00232 456 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 ASNA1O43681 348 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 SP1P08047 785 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 CD96P40200 585 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 MAGEA6P43360 314 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 CYB561P49447 251 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 VPS41P49754 854 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 CCR8P51685 355 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 CTBP1Q13363 440 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 SIX1Q15475 284 aaPredicted RBP19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 C3AR1Q16581 482 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 MAPKAPK3Q16644 382 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 LCTLQ6UWM7 567 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 CPNE9Q8IYJ1 553 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 SPC24Q8NBT2 197 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 MCUQ8NE86 351 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 ALKBH8Q96BT7 664 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 TBC1D20Q96BZ9 403 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 GALPQ9UBC7 116 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 TINAGQ9UJW2 476 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 NPIPA1Q9UND3 350 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 ZNF835Q9Y2P0 537 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 MEMO1Q9Y316 297 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 NAALAD2Q9Y3Q0 740 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 SCN2AQ99250 2005 aa19.81■□□□□ 0.76
SQSTM1-210ENST00000506042 RDH16O75452 317 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 KRT14P02533 472 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 KCNJ1P48048 391 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 TERF1P54274 439 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 CSNK1G2P78368 415 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 PWP1Q13610 501 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 FCRLBQ6BAA4 426 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 AGTRAPQ6RW13 159 aa19.8■□□□□ 0.76
SQSTM1-210ENST00000506042 GALNTL5Q7Z4T8 443 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms