RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 LRRC1Q9BTT6 524 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 DERL2Q9GZP9 239 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 LHPPQ9H008 270 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 LRRC4CQ9HCJ2 640 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 HCN3Q9P1Z3 774 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 MKL2Q9ULH7 1088 aa31.47■■■□□ 2.63
CBX4-203ENST00000494546 MYO18BQ8IUG5 2567 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 TRBC2A0A5B9 178 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 SGK494L7N484 410 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 NDUFS4O43181 175 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 WISP3O95389 354 aaPredicted RBP31.46■■■□□ 2.63
CBX4-203ENST00000494546 C1QAP02745 245 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 SERPIND1P05546 499 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 Q0VFX4 171 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 KBTBD12Q3ZCT8 623 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 AGAP7PQ5VUJ5 663 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 IGFL3Q6UXB1 125 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 ZADH2Q8N4Q0 377 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 AGAP4Q96P64 663 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 SARGQ9BW04 601 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 SPNS1Q9H2V7 528 aa31.46■■■□□ 2.63
CBX4-203ENST00000494546 NSG1A0A0A6YYJ2 146 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 BMP10O95393 424 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 CCDC166P0CW27 439 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 COX6A1P12074 109 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 STMN1P16949 149 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 STX2P32856 288 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 HNMTP50135 292 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 WHAMMP3Q1A5X7 153 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 PLEKHN1Q494U1 663 aaPredicted RBP31.45■■■□□ 2.63
CBX4-203ENST00000494546 NDUFAF7Q7L592 441 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 TMPRSS11BQ86T26 416 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 OR51Q1Q8NH59 317 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 FBF1Q8TES7 1133 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 MOCOSQ96EN8 888 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 B3GNT3Q9Y2A9 372 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 KCNE2Q9Y6J6 123 aa31.45■■■□□ 2.63
CBX4-203ENST00000494546 NCF1BA6NI72 391 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 NCF1CA8MVU1 366 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 JRKO75564 520 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 NCF1P14598 390 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 SPRP35270 261 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 C18orf21Q32NC0 220 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 PRR30Q53SZ7 412 aaPredicted RBP31.44■■■□□ 2.62
CBX4-203ENST00000494546 GRTP1Q5TC63 336 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 MFSD4BQ5TF39 518 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 SHISA5Q8N114 240 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 PELI2Q9HAT8 420 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 MAP10Q9P2G4 905 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 SLC22A7Q9Y694 548 aa31.44■■■□□ 2.62
CBX4-203ENST00000494546 VPS4BO75351 444 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 RDH16O75452 317 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 FAM155BO75949 473 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 WDR47O94967 919 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 INPP5JQ15735 1006 aaPredicted RBP31.43■■■□□ 2.62
CBX4-203ENST00000494546 NXPE4Q6UWF7 544 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 PDSS2Q86YH6 399 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 RHBDF1Q96CC6 855 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 AIF1LQ9BQI0 150 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 ILKAPQ9H0C8 392 aaPredicted RBP31.43■■■□□ 2.62
CBX4-203ENST00000494546 VPS4AQ9UN37 437 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 NAALAD2Q9Y3Q0 740 aa31.43■■■□□ 2.62
CBX4-203ENST00000494546 KLHL18O94889 574 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 GDF5P43026 501 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 XCR1P46094 333 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 SCTRP47872 440 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 REEP5Q00765 189 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 GUCY2DQ02846 1103 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 RGS1Q08116 209 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 PWP1Q13610 501 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 TGFBIQ15582 683 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 MINDY4Q4G0A6 757 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 KBTBD2Q8IY47 623 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 VN1R1Q9GZP7 353 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 ZFP69BQ9UJL9 534 aa31.42■■■□□ 2.62
CBX4-203ENST00000494546 IGHV1-45A0A0A0MS14 117 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 ZNF860A6NHJ4 632 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 PCDH17O14917 1159 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 CD1DP15813 335 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 EFNA3P52797 238 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 RAB10P61026 200 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 SLMAPQ14BN4 828 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 EFTUD2Q15029 972 aaKnown RBP eCLIP31.41■■■□□ 2.622e-7■■■■■ 29.7
CBX4-203ENST00000494546 HERC3Q15034 1050 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 ZKSCAN8Q15776 578 aaPredicted RBP31.41■■■□□ 2.62
CBX4-203ENST00000494546 GPSM1Q86YR5 675 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 METTL21AQ8WXB1 218 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 UBR5O95071 2799 aaPredicted RBP31.41■■■□□ 2.62
CBX4-203ENST00000494546 NBASA2RRP1 2371 aa31.41■■■□□ 2.62
CBX4-203ENST00000494546 C8orf89P0DMQ9 161 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 VARSP26640 1264 aaKnown RBP31.4■■■□□ 2.62
CBX4-203ENST00000494546 ATP6V0D1P61421 351 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 RBBP5Q15291 538 aaKnown RBP31.4■■■□□ 2.62
CBX4-203ENST00000494546 IQCKQ8N0W5 287 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 ZDHHC18Q9NUE0 388 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 RIC8BQ9NVN3 520 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 WWOXQ9NZC7 414 aa31.4■■■□□ 2.62
CBX4-203ENST00000494546 SPENQ96T58 3664 aaKnown RBP31.39■■■□□ 2.62
CBX4-203ENST00000494546 LOC102723996A0A087X1L8 192 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 A0A1W2PQ72 361 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms