RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	DOHH	Q9BU89	302 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	RIOK2	Q9BVS4	552 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SGPP1	Q9BX95	441 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	ABCG8	Q9H221	673 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	RUBCNL	Q9H714	662 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PELI2	Q9HAT8	420 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TPT1P8	Q9HAU6	139 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	MYNN	Q9NPC7	610 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	NECTIN3	Q9NQS3	549 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	TBCCD1	Q9NVR7	557 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	KIF17	Q9P2E2	1029 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	STOX2	Q9P2F5	926 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SLCO3A1	Q9UIG8	710 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	CDV3	Q9UKY7	258 aa	Known RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PSME2	Q9UL46	239 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	SCML1	Q9UN30	329 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	FAF1	Q9UNN5	650 aa	Predicted RBP	6.12	□□□□□ -1.43
FN1-223	ENST00000490833	PTGDR2	Q9Y5Y4	395 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833	HEBP2	Q9Y5Z4	205 aa		6.12	□□□□□ -1.43
FN1-223	ENST00000490833		A0A1B0GTL3	188 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SH3D21	A4FU49	640 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	TRIM64B	A6NI03	449 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SNTN	A6NMZ2	147 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	KPNA3	O00505	521 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	TOR1B	O14657	336 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	KMO	O15229	486 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SLC22A1	O15245	554 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CBFA2T3	O75081	653 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SERPINB7	O75635	380 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SEC14L2	O76054	403 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	KCNK5	O95279	499 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	C1orf105	O95561	183 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	BCL10	O95999	233 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	C9	P02748	559 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CISD3	P0C7P0	127 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	DRD2	P14416	443 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	NCK1	P16333	377 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ENG	P17813	658 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ITIH1	P19827	911 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CRHBP	P24387	322 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	IGFBP5	P24593	272 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	OXTR	P30559	389 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	RRM2	P31350	389 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	TIA1	P31483	386 aa	Known RBP eCLIP	6.11	□□□□□ -1.43	9e-7	■■■■□ 20.1
FN1-223	ENST00000490833	PCGF2	P35227	344 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	DCT	P40126	519 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CTSO	P43234	321 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	PXN	P49023	591 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	STK19	P49842	368 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	HTR6	P50406	440 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ST13	P50502	369 aa	Known RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	GZMM	P51124	257 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SELENOW	P63302	87 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ABAT	P80404	500 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	DEFB103A	P81534	67 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CNTN1	Q12860	1018 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	MLC1	Q15049	377 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	FNDC3B	Q53EP0	1204 aa	Known RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	PRSS36	Q5K4E3	855 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	RNFT1	Q5M7Z0	435 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	OTUD3	Q5T2D3	398 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	FOXB2	Q5VYV0	432 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	KIAA1614	Q5VZ46	1190 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ZNF385C	Q66K41	422 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SDE2	Q6IQ49	451 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	FAM117B	Q6P1L5	589 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	NXPE4	Q6UWF7	544 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SLCO4C1	Q6ZQN7	724 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833		Q6ZVL8	140 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	KCTD8	Q6ZWB6	473 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ERN2	Q76MJ5	926 aa	Known RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ARHGAP22	Q7Z5H3	698 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	AMZ2	Q86W34	360 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	C17orf64	Q86WR6	236 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CLVS1	Q8IUQ0	354 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ARMC8	Q8IUR7	673 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	EPHX4	Q8IUS5	362 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	P3H2	Q8IVL5	708 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	DCUN1D3	Q8IWE4	304 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	YAF2	Q8IY57	180 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	TTC16	Q8NEE8	873 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	DENND6B	Q8NEG7	585 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	OR7G3	Q8NG95	312 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	OR52N2	Q8NGI0	321 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	C9orf43	Q8TAL5	461 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	POF1B	Q8WVV4	589 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	TRUB1	Q8WWH5	349 aa	Known RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SLC5A11	Q8WWX8	675 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SMPDL3A	Q92484	453 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	EZH1	Q92800	747 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	SMARCD2	Q92925	531 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	BHMT	Q93088	406 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	BORCS5	Q969J3	196 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ESAM	Q96AP7	390 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	PPCDC	Q96CD2	204 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	ISOC1	Q96CN7	298 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	C11orf24	Q96F05	449 aa	Predicted RBP	6.11	□□□□□ -1.43
FN1-223	ENST00000490833	MED8	Q96G25	268 aa		6.11	□□□□□ -1.43
FN1-223	ENST00000490833	CRELD1	Q96HD1	420 aa		6.11	□□□□□ -1.43

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