RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CDH11P55287 796 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 AP1S2P56377 157 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 RAB15P59190 212 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 RAB39AQ14964 217 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 MYLK3Q32MK0 819 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 CDCA2Q69YH5 1023 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-209ENST00000489180 NANOGP8Q6NSW7 305 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 TTLQ8NG68 377 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 NANOGQ9H9S0 305 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 GNG8Q9UK08 70 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 A0A0D9SEW6 157 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 LCHNA4D1U4 455 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 FAM72CH0Y354 149 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-209ENST00000489180 VIPR1P32241 457 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 TUBA1BP68363 451 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.33
NPHP4-209ENST00000489180 GRB7Q14451 532 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 RUNDC3AQ59EK9 446 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 FAM72AQ5TYM5 149 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 FAM72DQ6L9T8 149 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 NIPAL1Q6NVV3 410 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 CDHR3Q6ZTQ4 885 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 TUBA1AQ71U36 451 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 FAM72BQ86X60 149 aa17.08■□□□□ 0.33
NPHP4-209ENST00000489180 TEX46H3BTG2 121 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 KHNYNO15037 678 aaKnown RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 FANCGO15287 622 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 FOXD2O60548 495 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 GLDCP23378 1020 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 CXCR1P25024 350 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 PREPP48147 710 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 CDKN1CP49918 316 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 RAB8AP61006 207 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ABHD18Q0P651 414 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ARFRP1Q13795 201 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ABCA11PQ4W5N1 156 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 C14orf80Q86SX3 495 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF514Q96K75 400 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 NPY6RQ99463 290 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 SCML2Q9UQR0 700 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ANKRD26Q9UPS8 1709 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 EBLN1P0CF75 366 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 FOSL2P15408 326 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF829Q3KNS6 432 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 TICAM1Q8IUC6 712 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 OR4K1Q8NGD4 311 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 PRR11Q96HE9 360 aaPredicted RBP17.08■□□□□ 0.32
NPHP4-209ENST00000489180 FUZQ9BT04 418 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 NDC1Q9BTX1 674 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 TSSK6Q9BXA6 273 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 FAM53CQ9NYF3 392 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 NUP50Q9UKX7 468 aa17.08■□□□□ 0.32
NPHP4-209ENST00000489180 KDELR3O43731 214 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 MMP20O60882 483 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 IFNA7P01567 189 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 SRPRAP08240 638 aaKnown RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 CBSLP0DN79 551 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 CBSP35520 551 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 PRKCDQ05655 676 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ENPP2Q13822 863 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 SEMA3AQ14563 771 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 GALNT12Q8IXK2 581 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 KRTCAP2Q8N6L1 136 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 TCEANCQ8N8B7 351 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 OR52E4Q8NGH9 312 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 GPR88Q9GZN0 384 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 TRIM36Q9NQ86 728 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 KLF15Q9UIH9 416 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 POP7O75817 140 aaKnown RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 SCGB1D2O95969 90 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ARPC4P59998 168 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 RAB8BQ92930 207 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 IL12RB2Q99665 862 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 GLOD5A6NK44 160 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ALDOAP04075 364 aaKnown RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 HSD17B2P37059 387 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 TUBA3EQ6PEY2 450 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 AGTRAPQ6RW13 159 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 PRR23BQ6ZRT6 265 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 SYVN1Q86TM6 617 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 CMTM8Q8IZV2 173 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 INO80EQ8NBZ0 244 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 MOCS1Q9NZB8 636 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 MATN1P21941 496 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 DNAJB13P59910 316 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 PAMR1Q6UXH9 720 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF431Q8TF32 576 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 TRIM43Q96BQ3 446 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ADAM7Q9H2U9 754 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 NLE1Q9NVX2 485 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 I3L521 148 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 INHAP05111 366 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 PIK3CBP42338 1070 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 HNRNPA0Q13151 305 aaKnown RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 SLC35F1Q5T1Q4 408 aa17.07■□□□□ 0.32
NPHP4-209ENST00000489180 ZBTB8BQ8NAP8 495 aaPredicted RBP17.07■□□□□ 0.32
NPHP4-209ENST00000489180 TBL1XR1Q9BZK7 514 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms