RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MYBL2P10244 700 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ICAM2P13598 275 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 NPPBP16860 134 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 IL1RNP18510 177 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 GNAZP19086 355 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF10P21506 573 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 JAK1P23458 1154 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CRABP2P29373 138 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SLC26A3P40879 764 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 BCL6P41182 706 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 XCR1P46094 333 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PGGT1BP53609 377 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 RAB10P61026 200 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ARG2P78540 354 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MAT1AQ00266 395 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TIAL1Q01085 375 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SLC7A5Q01650 507 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MEF2AQ02078 507 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ACTN3Q08043 901 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PWP1Q13610 501 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TSNQ15631 228 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 KIRREL2Q6UWL6 708 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TAOK1Q7L7X3 1001 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CTAGE6Q86UF2 777 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 THOC6Q86W42 341 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CTAGE4Q8IX94 777 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TRPV3Q8NET8 790 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 TTLQ8NG68 377 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 OR11G2Q8NGC1 345 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 OR56A3Q8NH54 315 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SUN3Q8TAQ9 357 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 FBXO25Q8TCJ0 367 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 IFT81Q8WYA0 676 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 C8orf44Q96CB5 159 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MRRFQ96E11 262 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MAGEB10Q96LZ2 347 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 RBBP8Q99708 897 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SMAD5Q99717 465 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 WDR77Q9BQA1 342 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 WDR83Q9BRX9 315 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 UNKQ9C0B0 810 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 CAB39LQ9H9S4 337 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PELI2Q9HAT8 420 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MLXIPLQ9NP71 852 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 GRHL1Q9NZI5 618 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 PLAAQ9Y263 795 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 B3GNT3Q9Y2A9 372 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 MTO1Q9Y2Z2 717 aaKnown RBP8.66□□□□□ -1.02
HDAC6-232ENST00000489053 SEC16AO15027 2179 aa8.66□□□□□ -1.02
HDAC6-232ENST00000489053 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF860A6NHJ4 632 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 FAM159BA6NKW6 160 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 FANCGO15287 622 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 RDH16O75452 317 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 PIAS1O75925 651 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 KLHL18O94889 574 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 MED26O95402 600 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ALOX12P18054 663 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 IL10P22301 178 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 HNF4AP41235 474 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 GLRBP48167 497 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 CDKL1Q00532 357 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 TGM3Q08188 693 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 CDC16Q13042 620 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 HIST2H2ACQ16777 129 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SYT16Q17RD7 645 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 KBTBD12Q3ZCT8 623 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SLC6A19Q695T7 634 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 HIST2H2AA3Q6FI13 130 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SULT1C3Q6IMI6 304 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 KLC3Q6P597 504 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 NXPE4Q6UWF7 544 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SBSNQ6UWP8 590 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ISLR2Q6UXK2 745 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ZNF572Q7Z3I7 529 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 VN1R4Q7Z5H5 301 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 CEP97Q8IW35 865 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 SPATA6LQ8N4H0 392 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ARMC2Q8NEN0 867 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ABHD11Q8NFV4 315 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 OR51Q1Q8NH59 317 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 DNAJB14Q8TBM8 379 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 FBF1Q8TES7 1133 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 NEIL2Q969S2 332 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 CYTH2Q99418 400 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 GPR22Q99680 433 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 TGIF2Q9GZN2 237 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 DERL2Q9GZP9 239 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 COPS7BQ9H9Q2 264 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-232ENST00000489053 PLAC1Q9HBJ0 212 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 AGPAT4Q9NRZ5 378 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 DNAJC11Q9NVH1 559 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ABI3Q9P2A4 366 aa8.65□□□□□ -1.02
HDAC6-232ENST00000489053 ZFP69BQ9UJL9 534 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms