RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 XCR1P46094 333 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 CCR8P51685 355 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 AP1S2P56377 157 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ARG2P78540 354 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 FRG1Q14331 258 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 PCOLCEQ15113 449 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 MINDY4Q4G0A6 757 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 CATSPEREQ5SY80 951 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 B3GNTL1Q67FW5 361 aaPredicted RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ZC3HC1Q86WB0 502 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 PDSS2Q86YH6 399 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ZNF740Q8NDX6 193 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 OR4K1Q8NGD4 311 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 OR1N1Q8NGS0 311 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 METTL21AQ8WXB1 218 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 FBXL8Q96CD0 374 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 MOCOSQ96EN8 888 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 PDLIM5Q96HC4 596 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 PDLIM2Q96JY6 352 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 CYTH2Q99418 400 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 AGPAT4Q9NRZ5 378 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 RIC8BQ9NVN3 520 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 MOCS1Q9NZB8 636 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 NAALAD2Q9Y3Q0 740 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 UTP20O75691 2785 aaKnown RBP11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 NAV2Q8IVL1 2488 aa11.29□□□□□ -0.6
CCHCR1-215ENST00000488920 SHANK1Q9Y566 2161 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 DYTNA2CJ06 578 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 PCDH17O14917 1159 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 DNAJB6O75190 326 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 RDH16O75452 317 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 SEC24DO94855 1032 aaPredicted RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 SERPIND1P05546 499 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 UQCRHP07919 91 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ITGAMP11215 1152 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 SOX11P35716 441 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 TSFMP43897 325 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 TAS2R39P59534 338 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ELOAQ14241 798 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 CSHL1Q14406 222 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ZNF460Q14592 562 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 SBSNQ6UWP8 590 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 CAPN12Q6ZSI9 719 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 LANCL3Q6ZV70 420 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 CPEB2Q7Z5Q1 589 aaKnown RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ZBED8Q8IZ13 594 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 ATL1Q8WXF7 558 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 NEIL2Q969S2 332 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 IMMP1LQ96LU5 166 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 FAM129AQ9BZQ8 928 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 RNF14Q9UBS8 474 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 PLEKHB1Q9UF11 243 aaPredicted RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 USP9YO00507 2555 aaPredicted RBP11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 PCM1Q15154 2024 aa11.28□□□□□ -0.6
CCHCR1-215ENST00000488920 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 TRBC2A0A5B9 178 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 A1L4Q6 167 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 NPEPPSL1A6NEC2 478 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF860A6NHJ4 632 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 A8MUI8 341 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 E7ESA3 106 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 NDUFS4O43181 175 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 B3GALT4O96024 378 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC35G6P0C7Q6 338 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 ICAM2P13598 275 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 ZNF37AP17032 561 aaPredicted RBP11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 PPP1R3AQ16821 1122 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 THOC6Q86W42 341 aaKnown RBP11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 CEP97Q8IW35 865 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 NKAPQ8N5F7 415 aaKnown RBP11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 OR5T3Q8NGG3 340 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 ANKRD49Q8WVL7 239 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 FAR1Q8WVX9 515 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC5A11Q8WWX8 675 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 HAS2Q92819 552 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 PEX11GQ96HA9 241 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 MAGEB10Q96LZ2 347 aaPredicted RBP11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 TUBB6Q9BUF5 446 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 DPH5Q9H2P9 285 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SPNS1Q9H2V7 528 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SMYD2Q9NRG4 433 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 STMN3Q9NZ72 180 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC22A14Q9Y267 594 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 SLC22A7Q9Y694 548 aa11.27□□□□□ -0.61
CCHCR1-215ENST00000488920 CTAGE15A4D2H0 777 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 CDC123O75794 336 aaPredicted RBP11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 DDAH2O95865 285 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 WDPCPO95876 746 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 HNF4AP41235 474 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 TNFSF10P50591 281 aa11.26□□□□□ -0.61
CCHCR1-215ENST00000488920 OLR1P78380 273 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms