RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SPACA3Q8IXA5 215 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 DSELQ8IZU8 1212 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 TBC1D19Q8N5T2 526 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 ESX1Q8N693 406 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 IL22RA1Q8N6P7 574 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CCNYL1Q8N7R7 359 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 KDF1Q8NAX2 398 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 KCT2Q8NC54 265 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 RDH11Q8TC12 318 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CT55Q8WUE5 264 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CCT6BQ92526 530 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 MR1Q95460 341 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 PTCD3Q96EY7 689 aaKnown RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 GBP5Q96PP8 586 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 MECRQ9BV79 373 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 C1QTNF3Q9BXJ4 246 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CHST8Q9H2A9 424 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 NOL11Q9H8H0 719 aaKnown RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 TMBIM4Q9HC24 238 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 TXLNGQ9NUQ3 528 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 COPG2Q9UBF2 871 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 RNF11Q9Y3C5 154 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 AP1M2Q9Y6Q5 423 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 KCNE1BA0A087WTH5 132 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 LOC101059948A0A1B0GTJ6 334 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 A0A1B0GX78 115 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 C4orf51C9J302 202 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 MEN1O00255 615 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 FFAR3O14843 346 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 DSCR3O14972 297 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 GPR42O15529 346 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 H2AFYO75367 372 aaKnown RBP10.52□□□□□ -0.73
UBE4B-210ENST00000488228 SASH3O75995 380 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 WFS1O76024 890 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 SUPT7LO94864 414 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PCNAP12004 261 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 LIFP15018 202 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CPA3P15088 417 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 IL1RNP18510 177 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ALAS2P22557 587 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CXCR2P25025 360 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ITPKBP27987 946 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 HNF4AP41235 474 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CCNG1P51959 295 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 FOXL2P58012 376 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 DDX39BQ13838 428 aaKnown RBP10.52□□□□□ -0.73
UBE4B-210ENST00000488228 E2F2Q14209 437 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 MAP7Q14244 749 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 TBCCQ15814 346 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PAGE2BQ5JRK9 111 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 FAM69BQ5VUD6 431 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 GRHL2Q6ISB3 625 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 METTL2BQ6P1Q9 378 aaKnown RBP10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PRSS41Q7RTY9 318 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 HDXQ7Z353 690 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 SLC22A9Q8IVM8 553 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 C10orf107Q8IVU9 208 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 KRT78Q8N1N4 520 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 RNF175Q8N4F7 328 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ARHGEF39Q8N4T4 335 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CAMKVQ8NCB2 501 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PROKR1Q8TCW9 393 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 TRPC4APQ8TEL6 797 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PPP4R1Q8TF05 950 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 SLC13A3Q8WWT9 602 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 L3HYPDHQ96EM0 354 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 PKNOX2Q96KN3 472 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 LRFN5Q96NI6 719 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 SARGQ9BW04 601 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 NLNQ9BYT8 704 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 AICDAQ9GZX7 198 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 STMN4Q9H169 189 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-210ENST00000488228 GSTO2Q9H4Y5 243 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 LHX9Q9NQ69 397 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ENAMQ9NRM1 1142 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ZFP69BQ9UJL9 534 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 MID2Q9UJV3 735 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CROTQ9UKG9 612 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 ZMIZ1Q9ULJ6 1067 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 MAU2Q9Y6X3 613 aa10.52□□□□□ -0.73
UBE4B-210ENST00000488228 KMT2BQ9UMN6 2715 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-210ENST00000488228 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 PCSK5Q92824 1860 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 A0A0A6YYC8 382 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 ZNF860A6NHJ4 632 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 I3L1I5 382 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 SH3BGRLO75368 114 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 B3GALT4O96024 378 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 HBQ1P09105 142 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 WT1P19544 449 aaPredicted RBP10.51□□□□□ -0.73
UBE4B-210ENST00000488228 IMPDH1P20839 514 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 F8A1P23610 371 aa10.51□□□□□ -0.73
UBE4B-210ENST00000488228 HNRNPH1P31943 449 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms