RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 C6orf47O95873 294 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 JUNP05412 331 aaKnown RBP15.94■□□□□ 0.14
COL7A1-210ENST00000487017 KCNC3Q14003 757 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ELOA3BQ3SY89 546 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ATG9BQ674R7 924 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ARL9Q6T311 187 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ASRGL1Q7L266 308 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ELOA3Q8NG57 546 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 GRHL3Q8TE85 626 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 MRGPRX2Q96LB1 330 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 CERS4Q9HA82 394 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 PCDHB3Q9Y5E6 796 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 RCBTB2O95199 551 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ST3GAL3Q11203 375 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 CEACAM7Q14002 265 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 GRB7Q14451 532 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 TXNDC8Q6A555 127 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 SYCE2Q6PIF2 218 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 LRRTM4Q86VH4 590 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 DCAF4L2Q8NA75 395 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 OR2L3Q8NG85 312 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 PEX13Q92968 403 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 IMP4Q96G21 291 aaKnown RBP15.94■□□□□ 0.14
COL7A1-210ENST00000487017 UPK3BL1B0FP48 263 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 UPK3BL2E5RIL1 263 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 HAPLN1P10915 354 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-210ENST00000487017 NUP54Q7Z3B4 507 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 TMEM135Q86UB9 458 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 DNAJA4Q8WW22 397 aaPredicted RBP15.94■□□□□ 0.14
COL7A1-210ENST00000487017 SLC5A11Q8WWX8 675 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 SMPDL3AQ92484 453 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 DPAGT1Q9H3H5 408 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 H0YJX3 145 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 NDUFS4O43181 175 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 CHP2O43745 196 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 F2P00734 622 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 MAGEA11P43364 429 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 UNC50Q53HI1 259 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ZNF598Q86UK7 904 aaKnown RBP15.94■□□□□ 0.14
COL7A1-210ENST00000487017 FIZ1Q96SL8 496 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 ZNF696Q9H7X3 374 aa15.94■□□□□ 0.14
COL7A1-210ENST00000487017 TMEM88BA6NKF7 163 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 DGKEP52429 567 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 KCNAB2Q13303 367 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 GPR17Q13304 367 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 BRI3BPQ8WY22 251 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 NSUN5Q96P11 429 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 BRD7Q9NPI1 651 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 C12orf4Q9NQ89 552 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 DENRO43583 198 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 DFNA5O60443 496 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 SNNO75324 88 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 OAS1P00973 400 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 PABPC4LP0CB38 370 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 ITIH1P19827 911 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 EDNRAP25101 427 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 RPS3AP61247 264 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 OGFRL1Q5TC84 451 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 CEP97Q8IW35 865 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 C1orf216Q8TAB5 229 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 PRR11Q96HE9 360 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 RANBP9Q96S59 729 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 NDC1Q9BTX1 674 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 MYOCOSA0A1B0GUC4 107 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 SOX14O95416 240 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 IFNA7P01567 189 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 CDH11P55287 796 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 HACD2Q6Y1H2 254 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 ZNF676Q8N7Q3 588 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 CYB5D2Q8WUJ1 264 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 KXD1Q9BQD3 176 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 MMP27Q9H306 513 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 A0A096LPI6 279 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 EEDO75530 441 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 PUM1Q14671 1186 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 SYVN1Q86TM6 617 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 RNF130Q86XS8 419 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 REM2Q8IYK8 340 aaPredicted RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 KCT2Q8NC54 265 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 GAL3ST3Q96A11 431 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 DHRS1Q96LJ7 313 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 POP7O75817 140 aaKnown RBP15.93■□□□□ 0.14
COL7A1-210ENST00000487017 DNAJB5O75953 348 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 ZNF234Q14588 700 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 ANKRD26P1Q6NSI1 321 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 OR51B5Q9H339 312 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 MGAT4BQ9UQ53 548 aa15.93■□□□□ 0.14
COL7A1-210ENST00000487017 A0A0D9SEW6 157 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 INHAP05111 366 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 ZNF792Q3KQV3 632 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 CMPK2Q5EBM0 449 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 GPRC6AQ5T6X5 926 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 C22orf39Q6P5X5 142 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 TMIGD1Q6UXZ0 262 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 OR56A1Q8NGH5 318 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 CEP76Q8TAP6 659 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 SMPDL3BQ92485 455 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 SCLYQ96I15 445 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 UCKL1Q9NWZ5 548 aa15.92■□□□□ 0.14
COL7A1-210ENST00000487017 CHD2O14647 1828 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms