RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SLC36A4Q6YBV0 504 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 COMMD6Q7Z4G1 85 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 AMIGO1Q86WK6 493 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 NRROSQ86YC3 692 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 MFSD2AQ8NA29 543 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 ADCY4Q8NFM4 1077 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 OR13H1Q8NG92 308 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 NRG4Q8WWG1 115 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 TSACCQ96A04 125 aaPredicted RBP11.16□□□□□ -0.62
PRKCB-207ENST00000486868 THAP11Q96EK4 314 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 GBP5Q96PP8 586 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 SPATA9Q9BWV2 254 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 TMEM168Q9H0V1 697 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 SPNS1Q9H2V7 528 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 REEP4Q9H6H4 257 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 GORASP2Q9H8Y8 452 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 MRPS30Q9NP92 439 aaKnown RBP11.16□□□□□ -0.62
PRKCB-207ENST00000486868 CCM2LQ9NUG4 571 aaPredicted RBP11.16□□□□□ -0.62
PRKCB-207ENST00000486868 POT1Q9NUX5 634 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 VAPAQ9P0L0 249 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 SLAMF8Q9P0V8 285 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 ZNF624Q9P2J8 865 aaPredicted RBP11.16□□□□□ -0.62
PRKCB-207ENST00000486868 PACSIN3Q9UKS6 424 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 FBXL21Q9UKT6 434 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 AP4S1Q9Y587 144 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 ENTPD2Q9Y5L3 495 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 AP1M2Q9Y6Q5 423 aa11.16□□□□□ -0.62
PRKCB-207ENST00000486868 OR52A4PA6NMU1 304 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 RFXANKO14593 260 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 TGFB1P01137 390 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 THEGLP0DJG4 465 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 COX7A2P14406 83 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ACADSP16219 412 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 IL1RNP18510 177 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 TCN1P20061 433 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 SLC19A1P41440 591 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 TSFMP43897 325 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 MRPS22P82650 360 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CYP4F3Q08477 520 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ABHD18Q0P651 414 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 EIF2B5Q13144 721 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 SIM2Q14190 667 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 UBXN2BQ14CS0 331 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 RBBP5Q15291 538 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ZIC1Q15915 447 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ADPRMQ3LIE5 342 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CPTPQ5TA50 214 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 OGFRL1Q5TC84 451 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 PRPF38BQ5VTL8 546 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ZNF425Q6IV72 752 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 RNF111Q6ZNA4 994 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 FKBP9P1Q75LS8 142 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CALHM3Q86XJ0 350 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 MSRB3Q8IXL7 192 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 PAPD5Q8NDF8 572 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 SRFBP1Q8NEF9 429 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 TRPV3Q8NET8 790 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 OR2L3Q8NG85 312 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 GOT1L1Q8NHS2 421 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 C16orf78Q8WTQ4 265 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 LCN9Q8WX39 176 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 KLHDC7BQ96G42 594 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 SLC45A3Q96JT2 553 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 EGLN2Q96KS0 407 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 PPM1MQ96MI6 270 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 ECSITQ9BQ95 431 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CPPED1Q9BRF8 314 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 DUSP26Q9BV47 211 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 REXO4Q9GZR2 422 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 PCDHAC1Q9H158 963 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 KAT8Q9H7Z6 458 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CUEDC1Q9NWM3 386 aaPredicted RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 SLC25A37Q9NYZ2 338 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CNOT11Q9UKZ1 510 aaKnown RBP11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CORO2BQ9UQ03 480 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CA5BQ9Y2D0 317 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 CDH23Q9H251 3354 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 NUMA1Q14980 2115 aa11.15□□□□□ -0.62
PRKCB-207ENST00000486868 GNG14A0A1W2PPG7 69 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 GABRR3A8MPY1 467 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 EVPLLA8MZ36 301 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 H0YJX3 145 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 H7BY64 318 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 ARPC2O15144 300 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
PRKCB-207ENST00000486868 HNRNPRO43390 633 aaKnown RBP11.14□□□□□ -0.63
PRKCB-207ENST00000486868 TNFSF14O43557 240 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 DFNA5O60443 496 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 NDUFS2O75306 463 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 GMNNO75496 209 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 SCELO95171 688 aa11.14□□□□□ -0.63
PRKCB-207ENST00000486868 TBX6O95947 436 aaPredicted RBP11.14□□□□□ -0.63
PRKCB-207ENST00000486868 ABCB1P08183 1280 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms