RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 PPP3R2Q96LZ3 170 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 OR2A5Q96R48 311 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 NUDT22Q9BRQ3 303 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 SORBS1Q9BX66 1292 aaKnown RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 PITHD1Q9GZP4 211 aaPredicted RBP13.91□□□□□ -0.18
LRIF1-202ENST00000485275 SEMA6CQ9H3T2 930 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 ARL8BQ9NVJ2 186 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 C1orf109Q9NX04 203 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 VPS29Q9UBQ0 182 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 WDFY3Q8IZQ1 3526 aa13.91□□□□□ -0.18
LRIF1-202ENST00000485275 UNC13CQ8NB66 2214 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 MN1Q10571 1320 aaPredicted RBP13.9□□□□□ -0.18
LRIF1-202ENST00000485275 LOC105369274A0A096LPK9 316 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 IGHV5-51A0A0C4DH38 117 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 LOC102723532A0A0G2JNH3 316 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 A0A1W2PQM1 296 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 SLC9B1P1A6NJY1 282 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 C9JVG2 144 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 ANKRD28O15084 1053 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 ZW10O43264 779 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 CCDC22O60826 627 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 SEC22BO75396 215 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 KLHL18O94889 574 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 T-ENOLP0DO92 83 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 G6PDP11413 515 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 EZRP15311 586 aaKnown RBP13.9□□□□□ -0.18
LRIF1-202ENST00000485275 TGM1P22735 817 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 HRH2P25021 359 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 TACR1P25103 407 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 ZFP36L2P47974 494 aaKnown RBP13.9□□□□□ -0.18
LRIF1-202ENST00000485275 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
LRIF1-202ENST00000485275 NME5P56597 212 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 EMX2Q04743 252 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 PTGR1Q14914 329 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 DEFB110Q30KQ9 67 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 IL23RQ5VWK5 629 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 ARMC6Q6NXE6 501 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 KLHL35Q6PF15 583 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 USP53Q70EK8 1073 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 OR4N4Q8N0Y3 316 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 C19orf47Q8N9M1 422 aaKnown RBP13.9□□□□□ -0.18
LRIF1-202ENST00000485275 MFSD9Q8NBP5 474 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 CMTM7Q96FZ5 175 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 RAB33BQ9H082 229 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 LHX9Q9NQ69 397 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 KLHL3Q9UH77 587 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 PPT2Q9UMR5 302 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 TRIM33Q9UPN9 1127 aa13.9□□□□□ -0.18
LRIF1-202ENST00000485275 A0A0J9YVX5 310 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 PLPP1O14494 284 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 C9P02748 559 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 CKMT1AP12532 417 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 CDH3P22223 829 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 GPX3P22352 226 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 KLF10Q13118 480 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 C10orf62Q5T681 223 aaPredicted RBP13.89□□□□□ -0.19
LRIF1-202ENST00000485275 PAOXQ6QHF9 649 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 UBE3DQ7Z6J8 389 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 FUNDC1Q8IVP5 155 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 C1orf52Q8N6N3 182 aaKnown RBP13.89□□□□□ -0.19
LRIF1-202ENST00000485275 WDR48Q8TAF3 677 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 ZUFSPQ96AP4 578 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 F2RL3Q96RI0 385 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 CCDC3Q9BQI4 270 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 EDEM2Q9BV94 578 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 EBPLQ9BY08 206 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 KLHL31Q9H511 634 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 PFDN4Q9NQP4 134 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
LRIF1-202ENST00000485275 SEMA4GQ9NTN9 838 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 ANKMY1Q9P2S6 941 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 ATXN7L1Q9ULK2 861 aaPredicted RBP13.89□□□□□ -0.19
LRIF1-202ENST00000485275 AP1M2Q9Y6Q5 423 aa13.89□□□□□ -0.19
LRIF1-202ENST00000485275 TLCD2A6NGC4 264 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 ANKDD1BA6NHY2 528 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 RTCAO00442 366 aaKnown RBP13.88□□□□□ -0.19
LRIF1-202ENST00000485275 NDUFS4O43181 175 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 DUX1O43812 170 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 CLEC3AO75596 197 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 FKBP9O95302 570 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 GBAP04062 536 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 CD59P13987 128 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 PNLIPP16233 465 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 SDC1P18827 310 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 PIK3R1P27986 724 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 GRK3P35626 688 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 AHRP35869 848 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 NBL1P41271 181 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 GPLD1P80108 840 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 KHDRBS2Q5VWX1 349 aaKnown RBP13.88□□□□□ -0.19
LRIF1-202ENST00000485275 ZNF574Q6ZN55 896 aaPredicted RBP13.88□□□□□ -0.19
LRIF1-202ENST00000485275 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 POU5F2Q8N7G0 328 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 CHTF18Q8WVB6 975 aa13.88□□□□□ -0.19
LRIF1-202ENST00000485275 ATOH1Q92858 354 aaPredicted RBP13.88□□□□□ -0.19
LRIF1-202ENST00000485275 ZFYVE21Q9BQ24 234 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms