RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 ERVH48-1M5A8F1 160 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 CLGNO14967 610 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SIX3O95343 332 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 ITGB2P05107 769 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SLC35G6P0C7Q6 338 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PYGBP11216 843 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PIM1P11309 404 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 FBLP22087 321 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 AHRP35869 848 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PWP1Q13610 501 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 DSG2Q14126 1118 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 FAM53BQ14153 422 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 DOC2AQ14183 400 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 RASA2Q15283 850 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 RBBP5Q15291 538 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PCBP2Q15366 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 NKG7Q16617 165 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 NDUFA9Q16795 377 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 DEFB109BQ30KR1 87 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 LINC00303Q3SY05 128 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 XKR6Q5GH73 641 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SHISA5Q8N114 240 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PTGR2Q8N8N7 351 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 AMER3Q8N944 861 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 OR9A4Q8NGU2 314 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 OR2Y1Q8NGV0 311 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 ACMSDQ8TDX5 336 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 ADAMTS17Q8TE56 1095 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 WDR34Q96EX3 536 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 MVB12AQ96EY5 273 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PTCD3Q96EY7 689 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 MMABQ96EY8 250 aaPredicted RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SPSB2Q99619 263 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 MRPL57Q9BQC6 102 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 SLC26A1Q9H2B4 701 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 MRPL46Q9H2W6 279 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 EHD1Q9H4M9 534 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 WDR54Q9H977 334 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 COPG2Q9UBF2 871 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PADI2Q9Y2J8 665 aa12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PTRH2Q9Y3E5 179 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-209ENST00000485035 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 FFAR3O14843 346 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 GPR42O15529 346 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CDH16O75309 829 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 ALBP02768 609 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 SERPIND1P05546 499 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 UMODP07911 640 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 EPB42P16452 691 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 IL1RNP18510 177 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 FOLR3P41439 243 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CASP2P42575 452 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 PCDH1Q08174 1060 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 HYAL2Q12891 473 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CHIT1Q13231 466 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 E2F2Q14209 437 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 TMIGD1Q6UXZ0 262 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 SHISA6Q6ZSJ9 500 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 VN1R5Q7Z5H4 357 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 LCA5Q86VQ0 697 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 PDSS2Q86YH6 399 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CNPY4Q8N129 248 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 MREGQ8N565 214 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CREB3L4Q8TEY5 395 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 COL26A1Q96A83 441 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 PHF21BQ96EK2 531 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 BBC3Q96PG8 261 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 UBL7Q96S82 380 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 AICDAQ9GZX7 198 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 ZNF490Q9ULM2 529 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 POLHQ9Y253 713 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 SLC22A7Q9Y694 548 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 NBEAQ8NFP9 2946 aa12.89□□□□□ -0.35
SOX2-OT-209ENST00000485035 IGLV3-12A0A075B6K2 115 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 VSTM2BA6NLU5 285 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 A8MT66 165 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 C4orf51C9J302 202 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 STX16-NPEPL1H3BU86 382 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 E2F3O00716 465 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 STX16O14662 325 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 SMIM24O75264 130 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 H2AFYO75367 372 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 WFS1O76024 890 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 TBX6O95947 436 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 B3GALT4O96024 378 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 CD63P08962 238 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 CXCR2P25025 360 aa12.88□□□□□ -0.35
SOX2-OT-209ENST00000485035 EEF1DP29692 281 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms