RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 DIAPH2O60879 1101 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TPPPO94811 219 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CATP04040 527 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 AMY2AP04746 511 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ITGA2BP08514 1039 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 MPC1LP0DKB6 136 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PIM1P11309 404 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 MTHFD1P11586 935 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CKMT1AP12532 417 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PNLIPP16233 465 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 STMN1P16949 149 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PRKCAP17252 672 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CKMT2P17540 419 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 XRCC1P18887 633 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 GNAZP19086 355 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 AMY2BP19961 511 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CSRP1P21291 193 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 S100A1P23297 94 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 AOAHP28039 575 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CRABP2P29373 138 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 HSD17B3P37058 310 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 HHEXQ03014 270 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CBX3Q13185 183 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ILKQ13418 452 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC29A2Q14542 456 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 RPE65Q16518 533 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 GALNTL6Q49A17 601 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TAF1BQ53T94 588 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF789Q5FWF6 425 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 WASHC2DQ5SRD0 308 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 KCTD16Q68DU8 428 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 KLHL35Q6PF15 583 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 IYDQ6PHW0 289 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 UNC5DQ6UXZ4 953 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 FAM83HQ6ZRV2 1179 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 NEK10Q6ZWH5 1172 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TBC1D1Q86TI0 1168 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF554Q86TJ5 538 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PTRH1Q86Y79 214 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SPPL2CQ8IUH8 684 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC22A15Q8IZD6 547 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 RIBC1Q8N443 379 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SFRP1Q8N474 314 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 KYQ8NBH2 561 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SIDT2Q8NBJ9 832 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 GPR156Q8NFN8 814 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 WDR48Q8TAF3 677 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 UHMK1Q8TAS1 419 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC37A2Q8TED4 501 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 NAT14Q8WUY8 206 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ZFPM2Q8WW38 1151 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC44A1Q8WWI5 657 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TFGQ92734 400 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 FAM136AQ96C01 138 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CHMP6Q96FZ7 201 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC120Q96HB5 630 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 AHCYL2Q96HN2 611 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 APOLD1Q96LR9 279 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PAFAH2Q99487 392 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 GPR21Q99679 349 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 GPR22Q99680 433 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SMAD5Q99717 465 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TRIM54Q9BYV2 358 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TXLNGYQ9BZA5 131 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ASPSCR1Q9BZE9 553 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TRIM8Q9BZR9 551 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 MVB12BQ9H7P6 319 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 RNPEPL1Q9HAU8 725 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PRDM8Q9NQV8 689 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SMYD2Q9NRG4 433 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 IMP3Q9NV31 184 aaKnown RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 OXSMQ9NWU1 459 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC17A6Q9P2U8 582 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 LRIT1Q9P2V4 623 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PSMC3IPQ9P2W1 217 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 CPNE7Q9UBL6 633 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 POLG2Q9UHN1 485 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF180Q9UJW8 692 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 TLK1Q9UKI8 766 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ACSL6Q9UKU0 697 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 SLC39A10Q9ULF5 831 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PADI4Q9UM07 663 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PSMD13Q9UNM6 376 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 ASF1AQ9Y294 204 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 BTBD3Q9Y2F9 522 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PCYT1BQ9Y5K3 369 aaPredicted RBP5.99□□□□□ -1.45
SF3B1-209ENST00000479532 PSAT1Q9Y617 370 aa5.99□□□□□ -1.45
SF3B1-209ENST00000479532 A0A087X1B8 175 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 A6NCN8 305 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF839A8K0R7 811 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TRIM38O00635 465 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ZBTB14O43829 449 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 NOBOXO60393 691 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 GPC4O75487 556 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 SLCO2B1O94956 709 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 NTRK1P04629 796 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 MPOP05164 745 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 GP1BAP07359 652 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 C8GP07360 202 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 F7P08709 466 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms