RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 MACROD1Q9BQ69 325 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 AIF1LQ9BQI0 150 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 NTMT1Q9BV86 223 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 SHCBP1LQ9BZQ2 653 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 SPRTNQ9H040 489 aaPredicted RBP10.95□□□□□ -0.66
CBWD3-206ENST00000478048 EHD1Q9H4M9 534 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 POLR1BQ9H9Y6 1135 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 SLC39A1Q9NY26 324 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 NKIRAS1Q9NYS0 192 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 PLCL2Q9UPR0 1127 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 B3GALT1Q9Y5Z6 326 aa10.95□□□□□ -0.66
CBWD3-206ENST00000478048 TRBC2A0A5B9 178 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 C9orf172C9J069 976 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 POLR1CO15160 346 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 BIRC5O15392 142 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 P2RX6O15547 441 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 H2AFYO75367 372 aaKnown RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 OR4F21O95013 312 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 TNFSF15O95150 251 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 EIF2S1P05198 315 aaKnown RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 GRK3P35626 688 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 SCTRP47872 440 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 RPS15AP62244 130 aaKnown RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 SNRPNP63162 240 aaKnown RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 CYP4F2P78329 520 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 RELAQ04206 551 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 CHI3L2Q15782 390 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 CPSF6Q16630 551 aaKnown RBP eCLIP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 GRHL2Q6ISB3 625 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 PWWP2BQ6NUJ5 590 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 LETMD1Q6P1Q0 360 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 MILR1Q7Z6M3 343 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 PPP1R3BQ86XI6 285 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 LSMEM2Q8N112 164 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 L3MBTL4Q8NA19 623 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 NANOS1Q8WY41 292 aaKnown RBP10.94□□□□□ -0.66
CBWD3-206ENST00000478048 USP7Q93009 1102 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 EFCAB11Q9BUY7 163 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 SARGQ9BW04 601 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 TNFRSF12AQ9NP84 129 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 RARRES3Q9UL19 164 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 SCN3AQ9NY46 2000 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 FER1L5A0AVI2 2057 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 SDK2Q58EX2 2172 aa10.94□□□□□ -0.66
CBWD3-206ENST00000478048 KCNE1BA0A087WTH5 132 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 MED19A0JLT2 244 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-206ENST00000478048 TRABD2BA6NFA1 517 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 OR2B3O76000 313 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 CLDN9O95484 217 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 OTCP00480 354 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 CHRNGP07510 517 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 FGF5P12034 268 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 CHN1P15882 459 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 ZNF28P17035 718 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 BGNP21810 368 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 LCP2Q13094 533 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 HKDC1Q2TB90 917 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 WASHC2DQ5SRD0 308 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 LIPJQ5W064 366 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 TMIGD1Q6UXZ0 262 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 VN1R5Q7Z5H4 357 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.93□□□□□ -0.66
CBWD3-206ENST00000478048 KRT78Q8N1N4 520 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 RNF175Q8N4F7 328 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 MFSD9Q8NBP5 474 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 AGAP11Q8TF27 550 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 ZNF285Q96NJ3 590 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 SLC46A1Q96NT5 459 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 ZNF382Q96SR6 550 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 C20orf27Q9GZN8 174 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-206ENST00000478048 FANCEQ9HB96 536 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 MID1IP1Q9NPA3 183 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 IRAK4Q9NWZ3 460 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 SERTAD3Q9UJW9 196 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 PCDHGA8Q9Y5G5 932 aa10.93□□□□□ -0.66
CBWD3-206ENST00000478048 FFAR3O14843 346 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 GPR42O15529 346 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 ITM2AO43736 263 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 NPHS1O60500 1241 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 SRPX2O60687 465 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-206ENST00000478048 UGDHO60701 494 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 LYPLA1O75608 230 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-206ENST00000478048 MLYCDO95822 493 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 TBX6O95947 436 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-206ENST00000478048 NR1D1P20393 614 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 CXCR2P25025 360 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 HNF4AP41235 474 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 FOXA1P55317 472 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 ITGA1P56199 1179 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 ASPHQ12797 758 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 IL11RAQ14626 422 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 HSP90B2PQ58FF3 399 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 TCHHL1Q5QJ38 904 aaPredicted RBP10.92□□□□□ -0.66
CBWD3-206ENST00000478048 GPRIN3Q6ZVF9 776 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 DTWD1Q8N5C7 304 aa10.92□□□□□ -0.66
CBWD3-206ENST00000478048 ZNF655Q8N720 491 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms