RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
SEC13-215ENST00000477547 SLC39A1Q9NY26 324 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 RNF11Q9Y3C5 154 aa14.65□□□□□ -0.06
SEC13-215ENST00000477547 SCN3AQ9NY46 2000 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 KCNE1BA0A087WTH5 132 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 LOC105369274A0A096LPK9 316 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 LOC102723532A0A0G2JNH3 316 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 TMEM114B3SHH9 223 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 H0YGG7 62 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 UBFD1O14562 309 aaKnown RBP14.64□□□□□ -0.07
SEC13-215ENST00000477547 FFAR3O14843 346 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 POLR1CO15160 346 aaPredicted RBP14.64□□□□□ -0.07
SEC13-215ENST00000477547 GPR42O15529 346 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 P2RX6O15547 441 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 OR2B3O76000 313 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 EIF2S1P05198 315 aaKnown RBP14.64□□□□□ -0.07
SEC13-215ENST00000477547 CHRNGP07510 517 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 CTSBP07858 339 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 SLC35G6P0C7Q6 338 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 PCNAP12004 261 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ARF3P61204 181 aaPredicted RBP14.64□□□□□ -0.07
SEC13-215ENST00000477547 DDX39BQ13838 428 aaKnown RBP14.64□□□□□ -0.07
SEC13-215ENST00000477547 CPSF6Q16630 551 aaKnown RBP eCLIP14.64□□□□□ -0.07
SEC13-215ENST00000477547 FAM219BQ5XKK7 198 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ADNP2Q6IQ32 1131 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 VN1R4Q7Z5H5 301 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ASPGQ86U10 573 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 PPP1R3BQ86XI6 285 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 TRIM42Q8IWZ5 723 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 GPR135Q8IZ08 494 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 OR4N4Q8N0Y3 316 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ARFGAP2Q8N6H7 521 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 CSNK1A1LQ8N752 337 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 CDYL2Q8N8U2 506 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ANKRD53Q8N9V6 530 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 OR8K5Q8NH50 307 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 UBE2E3Q969T4 207 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 REPS1Q96D71 796 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 NXPE2Q96DL1 559 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 CNDP1Q96KN2 507 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 CTRCQ99895 268 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 SARGQ9BW04 601 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 POLR1BQ9H9Y6 1135 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ZFP69BQ9UJL9 534 aa14.64□□□□□ -0.07
SEC13-215ENST00000477547 ZSCAN9O15535 394 aaPredicted RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 NDUFS4O43181 175 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 LCMT2O60294 686 aaKnown RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 CRCPO75575 148 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ESRRBO95718 433 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 HSPA4LO95757 839 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 SERPIND1P05546 499 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ENO1P06733 434 aaKnown RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 FGF5P12034 268 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 GRK2P25098 689 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 GSTM2P28161 218 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 HMOX2P30519 316 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ARRB2P32121 409 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 AHRP35869 848 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 C19orf57Q0VDD7 668 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 IL11RAQ14626 422 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ZRSR2Q15696 482 aaKnown RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 ARL13AQ5H913 290 aaPredicted RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 TCTE1Q5JU00 501 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 CES4AQ5XG92 561 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 TTC19Q6DKK2 380 aaPredicted RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 FBXO42Q6P3S6 717 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 CEACAM20Q6UY09 585 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 CUZD1Q86UP6 607 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 TMEM126BQ8IUX1 230 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ZNF655Q8N720 491 aaPredicted RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 TTC29Q8NA56 475 aaPredicted RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 TTLQ8NG68 377 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 OR6Y1Q8NGX8 325 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 RAB3IL1Q8TBN0 382 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 CCT6BQ92526 530 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ZNF285Q96NJ3 590 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 DDA1Q9BW61 102 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 NLNQ9BYT8 704 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 SLC29A3Q9BZD2 475 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 NT5DC2Q9H857 520 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 EML4Q9HC35 981 aaKnown RBP14.63□□□□□ -0.07
SEC13-215ENST00000477547 FBXO8Q9NRD0 319 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 ZNF225Q9UK10 706 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 PCDHGA8Q9Y5G5 932 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 PCDHGA11Q9Y5H2 935 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 AP1M2Q9Y6Q5 423 aa14.63□□□□□ -0.07
SEC13-215ENST00000477547 NUP210LQ5VU65 1888 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 ANKDD1BA6NHY2 528 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 H0YIV9 168 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 SRPX2O60687 465 aaPredicted RBP14.62□□□□□ -0.07
SEC13-215ENST00000477547 LYPLA1O75608 230 aaPredicted RBP14.62□□□□□ -0.07
SEC13-215ENST00000477547 C1QL1O75973 258 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 TNFSF15O95150 251 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 TIAF1O95411 115 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 CAPN1P07384 714 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 SERPINB1P30740 379 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 ABCE1P61221 599 aaKnown RBP14.62□□□□□ -0.07
SEC13-215ENST00000477547 PHEXP78562 749 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 RGS1Q08116 209 aa14.62□□□□□ -0.07
SEC13-215ENST00000477547 BST1Q10588 318 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms