RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 DOC2AQ14183 400 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 SLBPQ14493 270 aaKnown RBP eCLIP11.82□□□□□ -0.52
APTX-220ENST00000476858 NKG7Q16617 165 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 PFKFB4Q16877 469 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 UGT8Q16880 541 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 VWA2Q5GFL6 755 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 SULT1C3Q6IMI6 304 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 TMEM214Q6NUQ4 689 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 OVCH1Q7RTY7 1134 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 ASPGQ86U10 573 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.82□□□□□ -0.52
APTX-220ENST00000476858 EIF1ADQ8N9N8 165 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 OR5T3Q8NGG3 340 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 STAG3L4Q8TBR4 150 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 PROKR1Q8TCW9 393 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 GPR87Q9BY21 358 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 CD244Q9BZW8 370 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 DNAJC11Q9NVH1 559 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 NUDT4Q9NZJ9 180 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 TMEM216Q9P0N5 145 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 CPSF2Q9P2I0 782 aaKnown RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 XPR1Q9UBH6 696 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 KCND3Q9UK17 655 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 ZNF490Q9ULM2 529 aaPredicted RBP11.82□□□□□ -0.52
APTX-220ENST00000476858 DYRK1BQ9Y463 629 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 KCNMB2Q9Y691 235 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 PIEZO2Q9H5I5 2752 aa11.82□□□□□ -0.52
APTX-220ENST00000476858 A0A0G2JN53 185 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 PABPN1LA6NDY0 278 aaKnown RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 SGK494L7N484 410 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 PPP6CO00743 305 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 KLK8O60259 260 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 STK16O75716 305 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 PDGFAP04085 211 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SERPIND1P05546 499 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SNRPAP09012 282 aaKnown RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 C1GALT1C1LP0DN25 315 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 AGXTP21549 392 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 OTX2P32243 289 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SLC26A3P40879 764 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 HNF4AP41235 474 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 HNMTP50135 292 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 ARSFP54793 590 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 OLR1P78380 273 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 ACAP2Q15057 778 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 RBBP5Q15291 538 aaKnown RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 TIFABQ6ZNK6 161 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SH2D5Q6ZV89 423 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SYVN1Q86TM6 617 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 ZSCAN1Q8NBB4 408 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 CREB3L4Q8TEY5 395 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 UBTD2Q8WUN7 234 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SLC13A3Q8WWT9 602 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 RERGQ96A58 199 aaPredicted RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 MMABQ96EY8 250 aaPredicted RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 UBL7Q96S82 380 aaPredicted RBP11.81□□□□□ -0.52
APTX-220ENST00000476858 SARGQ9BW04 601 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 PARD6BQ9BYG5 372 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 PELI2Q9HAT8 420 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 ZNF304Q9HCX3 659 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 HCN3Q9P1Z3 774 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 EMCNQ9ULC0 261 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SCN3AQ9NY46 2000 aa11.81□□□□□ -0.52
APTX-220ENST00000476858 SEC16AO15027 2179 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 VSTM2BA6NLU5 285 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 C9J4A7 227 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 NDUFS4O43181 175 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 SH3BGRLO75368 114 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 RDH16O75452 317 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 KRT38O76015 456 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ZNF888P0CJ79 500 aaPredicted RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 TSPAN8P19075 237 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 HRH2P25021 359 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 HNRNPH1P31943 449 aaKnown RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 RHDQ02161 417 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ILF2Q12905 390 aaKnown RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 NAA25Q14CX7 972 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 SETDB1Q15047 1291 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 PDK4Q16654 411 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 FAM83EQ2M2I3 478 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 MUM1Q2TAK8 710 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 FAM214AQ32MH5 1076 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ATG9BQ674R7 924 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 ZC3H7AQ8IWR0 971 aaKnown RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 TEX9Q8N6V9 391 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 PTGR2Q8N8N7 351 aaPredicted RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 OR2Y1Q8NGV0 311 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 RHEBL1Q8TAI7 183 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 COL26A1Q96A83 441 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 SCYL1Q96KG9 808 aa11.8□□□□□ -0.52
APTX-220ENST00000476858 DPH2Q9BQC3 489 aaPredicted RBP11.8□□□□□ -0.52
APTX-220ENST00000476858 RBCK1Q9BYM8 510 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms