RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PTGFRNQ9P2B2 879 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 FZD1Q9UP38 647 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RHBDD3Q9Y3P4 386 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CSNK1G3Q9Y6M4 447 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RGPD2P0DJD1 1756 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 A0A1B0GUH1 482 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PLSCR5A0PG75 271 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PIPSLA2A3N6 862 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ARHGEF35A5YM69 484 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CBY3A6NI87 242 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM238C9JI98 176 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CCDC188H7C350 402 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PFDN6O15212 129 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CHADO15335 359 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PEX10O60683 326 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DNAJA2O60884 412 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 BCAS1O75363 584 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 WISP1O95388 367 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 B3GALT4O96024 378 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 UGT2B4P06133 528 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CHRM2P08172 466 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CD63P08962 238 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM157BP0CG42 384 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ENO3P13929 434 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MTHFD2P13995 350 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MAOBP27338 520 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 OR1E1P30953 314 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DCTDP32321 178 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PBX3P40426 434 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MAGEA2P43356 314 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MAGEB1P43366 347 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLCO1A2P46721 670 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB28P51157 221 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RGS8P57771 180 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ETF1P62495 437 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 HPCAP84074 193 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TNP2Q05952 138 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MRPL49Q13405 166 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 PGM5Q15124 567 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 EIF2S3LQ2VIR3 472 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CHRFAM7AQ494W8 412 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM35AQ53FP2 167 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CMPK2Q5EBM0 449 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RABGAP1LQ5R372 815 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ATF7IP2Q5U623 682 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TDRD10Q5VZ19 366 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 USP43Q70EL4 1123 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB44Q7Z6P3 723 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 YTHDF3Q7Z739 585 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DPPA2Q7Z7J5 298 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 LHFPL4Q7Z7J7 247 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 LUZP2Q86TE4 346 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 HORMAD1Q86X24 394 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RBM45Q8IUH3 476 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CYP4Z2PQ8N1L4 340 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM199Q8N511 208 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ZBTB2Q8N680 514 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 FADS6Q8N9I5 356 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TC2NQ8N9U0 490 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM104Q8NE00 496 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 KBTBD7Q8WVZ9 684 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CACNG8Q8WXS5 425 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RAB24Q969Q5 203 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 CPNE4Q96A23 557 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MCRS1Q96EZ8 462 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 C1orf159Q96HA4 380 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 LINC00615Q96LM1 132 aaPredicted RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLITRK1Q96PX8 696 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 GAD1Q99259 594 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 DUSP26Q9BV47 211 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 C1orf43Q9BWL3 253 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ZC3H12CQ9C0D7 883 aaKnown RBP5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MARCH7Q9H992 704 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 ZC4H2Q9NQZ6 224 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SPG21Q9NZD8 308 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 GCNT4Q9P109 453 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 BCAP29Q9UHQ4 241 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 C3orf18Q9UK00 162 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 UTS2RQ9UKP6 389 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SCML1Q9UN30 329 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC6A14Q9UN76 642 aa5.87□□□□□ -1.47
SMARCE1-208ENST00000474246 RALGAPA2Q2PPJ7 1873 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM240BA0A1B0GVZ2 78 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 LINC00587B1AMM8 73 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 H3BQ06 376 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TOR1AO14656 332 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TM9SF1O15321 606 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 DNPH1O43598 174 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 BUD23O43709 281 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF862O60290 1169 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 C1QL1O75973 258 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 BAG3O95817 575 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 STAG3L1P0CL83 205 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 H2AFXP16104 143 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 DTYMKP23919 212 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 EEF1B2P24534 225 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 CRABP1P29762 137 aa5.86□□□□□ -1.47
SMARCE1-208ENST00000474246 TMPOP42166 694 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms