RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CCDC88CQ9P219 2028 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 FEZF1A0PJY2 475 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 CCDC189A1A4V9 331 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 NPEPPSL1A6NEC2 478 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 PYCARD-AS1I3L0S3 204 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 BMP10O95393 424 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 MED26O95402 600 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 JAK1P23458 1154 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 BCL6P41182 706 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 MAGEA4P43358 317 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 ISLR2Q6UXK2 745 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 KRT78Q8N1N4 520 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 RBMXL3Q8N7X1 1067 aaKnown RBP19.41■□□□□ 0.7
SNX13-206ENST00000474067 OR9A4Q8NGU2 314 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
SNX13-206ENST00000474067 AGPAT4Q9NRZ5 378 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 GPRC5BQ9NZH0 403 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 MAP10Q9P2G4 905 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 MED13Q9UHV7 2174 aa19.41■□□□□ 0.7
SNX13-206ENST00000474067 LOC102723996A0A087X1L8 192 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 A0A088AWK7 358 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 DYTNA2CJ06 578 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 CDC7O00311 574 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 ALOX12BO75342 701 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 WFS1O76024 890 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 SERPINA7P05543 415 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 CCDC166P0CW27 439 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 ZNF10P21506 573 aaPredicted RBP19.4■□□□□ 0.7
SNX13-206ENST00000474067 CRABP2P29373 138 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 RAB10P61026 200 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 TGFBIQ15582 683 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 INPP5JQ15735 1006 aaPredicted RBP19.4■□□□□ 0.7
SNX13-206ENST00000474067 MINDY4Q4G0A6 757 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 B3GNTL1Q67FW5 361 aaPredicted RBP19.4■□□□□ 0.7
SNX13-206ENST00000474067 TMEM207Q6UWW9 146 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 RAPH1Q70E73 1250 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 TMPRSS11BQ86T26 416 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 TBC1D1Q86TI0 1168 aaPredicted RBP19.4■□□□□ 0.7
SNX13-206ENST00000474067 ZC3H7AQ8IWR0 971 aaKnown RBP19.4■□□□□ 0.7
SNX13-206ENST00000474067 PARP9Q8IXQ6 854 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 OR51Q1Q8NH59 317 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 NT5CQ8TCD5 201 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 NEIL2Q969S2 332 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 MCMBPQ9BTE3 642 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 MFRPQ9BY79 579 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 ZNF160Q9HCG1 818 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 SLC22A14Q9Y267 594 aa19.4■□□□□ 0.7
SNX13-206ENST00000474067 TNRC6AQ8NDV7 1962 aaKnown RBP19.39■□□□□ 0.7
SNX13-206ENST00000474067 IGHV1-45A0A0A0MS14 117 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 SYNDIG1LA6NDD5 238 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 CLGNO14967 610 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 WDR47O94967 919 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 SERPIND1P05546 499 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 ALOX12P18054 663 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 IL1RNP18510 177 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 XCR1P46094 333 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 STXBP1P61764 594 aaKnown RBP19.39■□□□□ 0.69
SNX13-206ENST00000474067 MRPS25P82663 173 aaKnown RBP19.39■□□□□ 0.69
SNX13-206ENST00000474067 REEP5Q00765 189 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 MEF2AQ02078 507 aaPredicted RBP19.39■□□□□ 0.69
SNX13-206ENST00000474067 MFAP5Q13361 173 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 TLR1Q15399 786 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 TSNQ15631 228 aaKnown RBP19.39■□□□□ 0.69
SNX13-206ENST00000474067 IGFBP7Q16270 282 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 SULT1C3Q6IMI6 304 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 NXPE4Q6UWF7 544 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 IGFL2Q6UWQ7 119 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 Q6ZS92 163 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 GPSM1Q86YR5 675 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 CEP97Q8IW35 865 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 KLHDC8AQ8IYD2 350 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 ZCCHC10Q8TBK6 192 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 STAG3L4Q8TBR4 150 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 OR4K3Q96R72 315 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 WWOXQ9NZC7 414 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 PLAAQ9Y263 795 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 MTO1Q9Y2Z2 717 aaKnown RBP19.39■□□□□ 0.69
SNX13-206ENST00000474067 BOD1L1Q8NFC6 3051 aa19.39■□□□□ 0.69
SNX13-206ENST00000474067 KLHL18O94889 574 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 COX6A1P12074 109 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 SCTRP47872 440 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 FOXL2P58012 376 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 ZNF460Q14592 562 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 SLMAPQ14BN4 828 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 KBTBD12Q3ZCT8 623 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 GLE1Q53GS7 698 aaKnown RBP19.38■□□□□ 0.69
SNX13-206ENST00000474067 TMEM205Q6UW68 189 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 C17orf53Q8N3J3 647 aaPredicted RBP19.38■□□□□ 0.69
SNX13-206ENST00000474067 FAM26EQ8N5C1 309 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 DTWD1Q8N5C7 304 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 PPM1NQ8N819 430 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 KCT2Q8NC54 265 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 DNAJB14Q8TBM8 379 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 RHBDF1Q96CC6 855 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 TSNARE1Q96NA8 513 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 ZNF700Q9H0M5 742 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 EHD1Q9H4M9 534 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 NMRAL1Q9HBL8 299 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 LRRC4CQ9HCJ2 640 aa19.38■□□□□ 0.69
SNX13-206ENST00000474067 RNF112Q9ULX5 631 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms