RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 ALKBH8Q96BT7 664 aaKnown RBP17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 PYCR2Q96C36 320 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 OR4K3Q96R72 315 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 TAAR6Q96RI8 345 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 OLFM1Q99784 485 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 TUBB6Q9BUF5 446 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 IKZF3Q9UKT9 509 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 CHMP2BQ9UQN3 213 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 TEX264Q9Y6I9 313 aa17.76■□□□□ 0.43
CCDC88B-206ENST00000473405 IGHV3-20A0A0C4DH32 117 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 RDH16O75452 317 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 SEC24DO94855 1032 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 F10P00742 488 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 AP1S2P56377 157 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 MEF2AQ02078 507 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 PDAP1Q13442 181 aaKnown RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 MINDY4Q4G0A6 757 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 HECTD2Q5U5R9 776 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 CAPN13Q6MZZ7 669 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 HIBCHQ6NVY1 386 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 CREG2Q8IUH2 290 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 PDIK1LQ8N165 341 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 GPATCH11Q8N954 259 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 MFSD9Q8NBP5 474 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 ABHD11Q8NFV4 315 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 OR4K1Q8NGD4 311 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 SLC13A3Q8WWT9 602 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 CFAP36Q96G28 342 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 CYTH2Q99418 400 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 SARGQ9BW04 601 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 RNF32Q9H0A6 362 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 GRPEL1Q9HAV7 217 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 PPANQ9NQ55 473 aaKnown RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 OLAHQ9NV23 265 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 ARL15Q9NXU5 204 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 CORO1CQ9ULV4 474 aaPredicted RBP17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 FBN2P35556 2912 aa17.75■□□□□ 0.43
CCDC88B-206ENST00000473405 TRAV17A0A0B4J275 112 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 WFS1O76024 890 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 WDPCPO95876 746 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 HIST1H2AGP0C0S8 130 aaPredicted RBP17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 SLC35G6P0C7Q6 338 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 HIST1H2ADP20671 130 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 COL8A1P27658 744 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 TDGF1P3P51864 188 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 DR1Q01658 176 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 INAQ16352 499 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 PPP1R3AQ16821 1122 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 MFSD4BQ5TF39 518 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 DUPD1Q68J44 220 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 SBSNQ6UWP8 590 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 SYDE1Q6ZW31 735 aaPredicted RBP17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 CPEB2Q7Z5Q1 589 aaKnown RBP17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 KLHL7Q8IXQ5 586 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 BCORP1Q8N888 145 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 METTL21AQ8WXB1 218 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 FBXL8Q96CD0 374 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 MOCOSQ96EN8 888 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 HIST1H2AHQ96KK5 128 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 CAPZA3Q96KX2 299 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 HIST1H2AJQ99878 128 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 TRIM51Q9BSJ1 452 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 HAUS8Q9BT25 410 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 H2AFJQ9BTM1 129 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 FAM129AQ9BZQ8 928 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 ANKHQ9HCJ1 492 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 OSGIN2Q9Y236 505 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 VWA7Q9Y334 891 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 NAALAD2Q9Y3Q0 740 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 PSAT1Q9Y617 370 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 SLC22A7Q9Y694 548 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 CACNA1DQ01668 2161 aa17.74■□□□□ 0.43
CCDC88B-206ENST00000473405 ZNF860A6NHJ4 632 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 ICAM2P13598 275 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 GRK3P35626 688 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 CCR8P51685 355 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 AP2B1P63010 937 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 FRG1Q14331 258 aaKnown RBP17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 ZNF787Q6DD87 383 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 PLAG1Q6DJT9 500 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 FAM45BPQ6NSW5 357 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 TMEM207Q6UWW9 146 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 ANKRD37Q7Z713 158 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 AFAP1L2Q8N4X5 818 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 ZNF740Q8NDX6 193 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 FAM45AQ8TCE6 357 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 LRRC39Q96DD0 335 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 SNF8Q96H20 258 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 MAGEB10Q96LZ2 347 aaPredicted RBP17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 RBCK1Q9BYM8 510 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 SPNS1Q9H2V7 528 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 LANCL2Q9NS86 450 aa17.73■□□□□ 0.43
CCDC88B-206ENST00000473405 OTOGQ6ZRI0 2925 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 ADGRG4Q8IZF6 3080 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 TRBC2A0A5B9 178 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 NDUFS4O43181 175 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 LRRTM2O43300 516 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 SEC31AO94979 1220 aaKnown RBP17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 UQCRHP07919 91 aa17.72■□□□□ 0.43
CCDC88B-206ENST00000473405 ENO2P09104 434 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms