RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 MTFMTQ96DP5 389 aaKnown RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 CMTM7Q96FZ5 175 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 OR2A5Q96R48 311 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 CCT7Q99832 543 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 RHBGQ9H310 441 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 SLC39A1Q9NY26 324 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 VTI1BQ9UEU0 232 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 ZNF490Q9ULM2 529 aaPredicted RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 TSC22D4Q9Y3Q8 395 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 TCP11X1B4DZS4 312 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 B4E171 279 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 FOXE1O00358 373 aaPredicted RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 MANBAO00462 879 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 ZSCAN9O15535 394 aaPredicted RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 LCMT2O60294 686 aaKnown RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 PRAMEF4O60810 478 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 SNNO75324 88 aaPredicted RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 CD22P20273 847 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 PTX3P26022 381 aaPredicted RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 TSPAN7P41732 249 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 ID4P47928 161 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 PDX1P52945 283 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 SKP1P63208 163 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 CYP4F2P78329 520 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 MC2RQ01718 297 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 WASHC2DQ5SRD0 308 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 DCAF12Q5T6F0 453 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 PRAMEF9Q5VWM5 478 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 CEACAM20Q6UY09 585 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 TMPRSS7Q7RTY8 843 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 DDIASQ8IXT1 998 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCM2-205ENST00000472223 GBP7Q8N8V2 638 aaPredicted RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 HUS1BQ8NHY5 278 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 C7orf26Q96N11 449 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 MTERF1Q99551 399 aaKnown RBP16.11■□□□□ 0.17
CCM2-205ENST00000472223 ZPBPQ9BS86 351 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 NDC1Q9BTX1 674 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 ASPSCR1Q9BZE9 553 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 FBXO8Q9NRD0 319 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 OCIAD1Q9NX40 245 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 AHSPQ9NZD4 102 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 ZDHHC2Q9UIJ5 367 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 TIMM22Q9Y584 194 aa16.11■□□□□ 0.17
CCM2-205ENST00000472223 MDC1Q14676 2089 aaKnown RBP16.1■□□□□ 0.17
CCM2-205ENST00000472223 CEP250Q9BV73 2442 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 A0A088AWK7 358 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 SLC28A1O00337 649 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 PLD2O14939 933 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 RGS14O43566 566 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 SERPINA6P08185 405 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 HBQ1P09105 142 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 HSD3B1P14060 373 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 ZNF10P21506 573 aaPredicted RBP16.1■□□□□ 0.17
CCM2-205ENST00000472223 HSD3B2P26439 372 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 RAP1GDS1P52306 607 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 MAPK10P53779 464 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 ARSFP54793 590 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 CLDN6P56747 220 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 OCRLQ01968 901 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 C3orf38Q5JPI3 329 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 YOD1Q5VVQ6 348 aaPredicted RBP16.1■□□□□ 0.17
CCM2-205ENST00000472223 KANK2Q63ZY3 851 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 CLEC6AQ6EIG7 209 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 FRMPD2BQ6IN97 320 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 NIPAL1Q6NVV3 410 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 TMEM126BQ8IUX1 230 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 ZNF781Q8N8C0 355 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 ANKRD53Q8N9V6 530 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 PIWIL2Q8TC59 973 aaKnown RBP16.1■□□□□ 0.17
CCM2-205ENST00000472223 FCRL4Q96PJ5 515 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 TEFMQ96QE5 360 aaKnown RBP16.1■□□□□ 0.17
CCM2-205ENST00000472223 TAAR9Q96RI9 348 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 KCNA7Q96RP8 456 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 SERPINI1Q99574 410 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 SPNS1Q9H2V7 528 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 CCDC134Q9H6E4 229 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 BRF2Q9HAW0 419 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 FAM53CQ9NYF3 392 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 PSD3Q9NYI0 1048 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 PISDQ9UG56 409 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 ZNF225Q9UK10 706 aa16.1■□□□□ 0.17
CCM2-205ENST00000472223 LOC105369274A0A096LPK9 316 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 LOC102723532A0A0G2JNH3 316 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 TRPC5OSA6NMA1 111 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 NRP2O60462 931 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 PDYNP01213 254 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 KITP10721 976 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 SERPINB3P29508 390 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 RBMS1P29558 406 aaKnown RBP16.09■□□□□ 0.17
CCM2-205ENST00000472223 NEK2P51955 445 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 CSTF3Q12996 717 aaKnown RBP16.09■□□□□ 0.17
CCM2-205ENST00000472223 TMEM35AQ53FP2 167 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 GARNL3Q5VVW2 1013 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 FAM47EQ6ZV65 393 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 ABHD13Q7L211 337 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 OR4N4Q8N0Y3 316 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 WDR20Q8TBZ3 569 aa16.09■□□□□ 0.17
CCM2-205ENST00000472223 NT5CQ8TCD5 201 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms