RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 TSTA3Q13630 321 aaPredicted RBP17.82■□□□□ 0.44
SORT1-203ENST00000471996 ARHGAP19Q14CB8 494 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 P3H1Q32P28 736 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 ANKRD20A4Q4UJ75 823 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.82■□□□□ 0.44
SORT1-203ENST00000471996 ARSKQ6UWY0 536 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 PLD3Q8IV08 490 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 ZZZ3Q8IYH5 903 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 KIF2BQ8N4N8 673 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 FAM71DQ8N9W8 422 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 P2RY12Q9H244 342 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 IFNKQ9P0W0 207 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 ANAPC5Q9UJX4 755 aa17.82■□□□□ 0.44
SORT1-203ENST00000471996 SGK494L7N484 410 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 PEX1O43933 1283 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 PDE9AO76083 593 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 STATHP02808 62 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 TTPAP49638 278 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 MLF1P58340 268 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 TMEM198Q66K66 360 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 ADCK2Q7Z695 626 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 LUZP1Q86V48 1076 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 WFDC11Q8NEX6 87 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 OR5M3Q8NGP4 307 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 NANOS1Q8WY41 292 aaKnown RBP17.81■□□□□ 0.44
SORT1-203ENST00000471996 ARSGQ96EG1 525 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 C18orf12Q96KH6 178 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 SLC6A16Q9GZN6 736 aa17.81■□□□□ 0.44
SORT1-203ENST00000471996 MARCH4Q9P2E8 410 aaPredicted RBP17.81■□□□□ 0.44
SORT1-203ENST00000471996 ARHGEF33A8MVX0 844 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 MAGEB17A8MXT2 336 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 MYO1CO00159 1063 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 GAS8O95995 478 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 IL1RNP18510 177 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 ADRA1DP25100 572 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 PNLIPRP1P54315 467 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 OR4D2P58180 307 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 ABATP80404 500 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 C11orf63Q6NUN7 778 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 TMEM214Q6NUQ4 689 aaKnown RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 VN1R4Q7Z5H5 301 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 PRIMA1Q86XR5 153 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 ZFP62Q8NB50 900 aaPredicted RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 OR52N2Q8NGI0 321 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 OR10Q1Q8NGQ4 319 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 GOT1L1Q8NHS2 421 aaPredicted RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 TSLPQ969D9 159 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 EBNA1BP2Q99848 306 aaKnown RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 REPIN1Q9BWE0 567 aaKnown RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 CATSPERZQ9NTU4 200 aa17.8■□□□□ 0.44
SORT1-203ENST00000471996 TSR3Q9UJK0 312 aaKnown RBP17.8■□□□□ 0.44
SORT1-203ENST00000471996 KIAA1324LA8MWY0 1029 aaPredicted RBP17.79■□□□□ 0.44
SORT1-203ENST00000471996 CDC123O75794 336 aaPredicted RBP17.79■□□□□ 0.44
SORT1-203ENST00000471996 INHBBP09529 407 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 RPS3P23396 243 aaKnown RBP eCLIP17.79■□□□□ 0.442e-15■■■□□ 16.1
SORT1-203ENST00000471996 ADSLP30566 484 aaPredicted RBP17.79■□□□□ 0.44
SORT1-203ENST00000471996 HSD17B2P37059 387 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 ZFP36L2P47974 494 aaKnown RBP17.79■□□□□ 0.44
SORT1-203ENST00000471996 MPP1Q00013 466 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 GXYLT1Q4G148 440 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 CLEC9AQ6UXN8 241 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 LRRC6Q86X45 466 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 CDC20BQ86Y33 519 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 PWWP2AQ96N64 755 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 LANCL2Q9NS86 450 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 ABHD10Q9NUJ1 306 aa17.79■□□□□ 0.44
SORT1-203ENST00000471996 ZNF839A8K0R7 811 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 E7ENX8 843 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 CD3EAPO15446 510 aaKnown RBP17.78■□□□□ 0.44
SORT1-203ENST00000471996 KIF5CO60282 957 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 TJP3O95049 919 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 IL10P22301 178 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 ATP5DP30049 168 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
SORT1-203ENST00000471996 KIR2DL3P43628 341 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 NR0B1P51843 470 aaKnown RBP17.78■□□□□ 0.44
SORT1-203ENST00000471996 TAP2Q03519 686 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 GBX1Q14549 363 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 PAOXQ6QHF9 649 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 ARMC10Q8N2F6 343 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 PPFIBP2Q8ND30 876 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 PEX13Q92968 403 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 OR1F2PQ96R84 312 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 PKP4Q99569 1192 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 MACROD1Q9BQ69 325 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 TTYH2Q9BSA4 534 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 RBCK1Q9BYM8 510 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 DEFB127Q9H1M4 99 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 ANKHQ9HCJ1 492 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 PCDHA3Q9Y5H8 950 aa17.78■□□□□ 0.44
SORT1-203ENST00000471996 NSD1Q96L73 2696 aaPredicted RBP17.77■□□□□ 0.44
SORT1-203ENST00000471996 KCNE1BA0A087WTH5 132 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 NPIPA2E9PIF3 369 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 NPIPA3F8WFD2 350 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 H7BY64 318 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 FCHO1O14526 889 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 RDH16O75452 317 aa17.77■□□□□ 0.44
SORT1-203ENST00000471996 PSIP1O75475 530 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms