RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 OR5M3Q8NGP4 307 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 FAM136AQ96C01 138 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 RMND5BQ96G75 393 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 PWWP2AQ96N64 755 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 EBNA1BP2Q99848 306 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 MACROD1Q9BQ69 325 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 MARCH4Q9P2E8 410 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 KLF13Q9Y2Y9 288 aaPredicted RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 PCDHA3Q9Y5H8 950 aa17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 PHF3Q92576 2039 aaKnown RBP17.81■□□□□ 0.44
NCKIPSD-209ENST00000470006 GOLGA6L9A6NEM1 432 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF839A8K0R7 811 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 E7EVH7 732 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 KLK8O60259 260 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 CTNNA1P35221 906 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 PTPN7P35236 360 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 BCL6P41182 706 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 NUP107P57740 925 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 SLC26A5P58743 744 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 SNRPNP63162 240 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 ARHGAP11AQ6P4F7 1023 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 SULF2Q8IWU5 870 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZZZ3Q8IYH5 903 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 CYP4X1Q8N118 509 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZCCHC10Q8TBK6 192 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 ANKHQ9HCJ1 492 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 FAM114A2Q9NRY5 505 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 RIMKLBQ9ULI2 386 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 TFR2Q9UP52 801 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
NCKIPSD-209ENST00000470006 DNAJC13O75165 2243 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 ARHGEF33A8MVX0 844 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 H7BY64 318 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 SMAPO00193 183 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 MATN4O95460 622 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 SYF2O95926 243 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 GDF10P55107 478 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 NAP1L1P55209 391 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 RWDD2BP57060 319 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 ABATP80404 500 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 ACVR1Q04771 509 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 ARHGAP19Q14CB8 494 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 LRRC6Q86X45 466 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 PPHLN1Q8NEY8 458 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 GOT1L1Q8NHS2 421 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 TSLPQ969D9 159 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 PEX11GQ96HA9 241 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 PRAP1Q96NZ9 151 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 PKP4Q99569 1192 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 GPATCH1Q9BRR8 931 aaKnown RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 SLC6A16Q9GZN6 736 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 DEFB127Q9H1M4 99 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 P2RY12Q9H244 342 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 CLEC4MQ9H2X3 399 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 DLL4Q9NR61 685 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 RPH3AQ9Y2J0 694 aaPredicted RBP17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 TCAF1Q9Y4C2 921 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 DUSP10Q9Y6W6 482 aa17.79■□□□□ 0.44
NCKIPSD-209ENST00000470006 CDK2AP1O14519 115 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 FCHO1O14526 889 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 PEX1O43933 1283 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 RDH16O75452 317 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 CTAG2O75638 210 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 CATP04040 527 aaKnown RBP17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 ERGP11308 486 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 FMO4P31512 558 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 HSD17B2P37059 387 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 HLCSP50747 726 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 RELAQ04206 551 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 CMPK2Q5EBM0 449 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 BIVMQ86UB2 503 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF358Q9NW07 568 aa17.78■□□□□ 0.44
NCKIPSD-209ENST00000470006 SYCE3A1L190 88 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ERI2A8K979 691 aaKnown RBP17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 MYO1CO00159 1063 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 PROM1O43490 865 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 MFAP3LO75121 409 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 CHRM3P20309 590 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 GRIA1P42261 906 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 MLF1P58340 268 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 GPR85P60893 370 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ADAM8P78325 824 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 RHAGQ02094 409 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 SKOR2Q2VWA4 1001 aaPredicted RBP17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 PAOXQ6QHF9 649 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF227Q86WZ6 799 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 PLPP5Q8NEB5 264 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 OR52N2Q8NGI0 321 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ELP5Q8TE02 316 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF407Q9C0G0 2248 aa17.77■□□□□ 0.44
NCKIPSD-209ENST00000470006 ZNF860A6NHJ4 632 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 MAGEB17A8MXT2 336 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 NPIPA2E9PIF3 369 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 NPIPA3F8WFD2 350 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 CBFA2T2O43439 604 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 NIPSNAP2O75323 286 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 SLC16A8O95907 504 aa17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 RPS3P23396 243 aaKnown RBP eCLIP17.76■□□□□ 0.43
NCKIPSD-209ENST00000470006 ADSLP30566 484 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms