RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ZNF740Q8NDX6 193 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ABHD11Q8NFV4 315 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 PIWIL2Q8TC59 973 aaKnown RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CHMP6Q96FZ7 201 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 MAP3K3Q99759 626 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 EPB41L1Q9H4G0 881 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 CLK4Q9HAZ1 481 aaKnown RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 PNPOQ9NVS9 261 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 TMEM9Q9P0T7 183 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 ATXN7L1Q9ULK2 861 aaPredicted RBP6.59□□□□□ -1.35
SCAF4-204ENST00000467731 STK38LQ9Y2H1 464 aa6.59□□□□□ -1.35
SCAF4-204ENST00000467731 SEC16AO15027 2179 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 A0A0J9YY10 115 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 AZIN1O14977 448 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ZW10O43264 779 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CRCPO75575 148 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CCNDBP1O95273 360 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 C1GALT1C1LP0DN25 315 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 HGFP14210 728 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 HOXB3P14651 431 aaPredicted RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 JUPP14923 745 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CDH3P22223 829 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 GRIA3P42263 894 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CCR8P51685 355 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CSNK1G2P78368 415 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CCL7P80098 99 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PCDH1Q08174 1060 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 COX10Q12887 443 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 SLBPQ14493 270 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 TBCCQ15814 346 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 SLC5A12Q1EHB4 618 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 GGTA1PQ4G0N0 100 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 GKAP1Q5VSY0 366 aaPredicted RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 GRHL2Q6ISB3 625 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 TMPRSS9Q7Z410 1059 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PLD3Q8IV08 490 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 METTL6Q8TCB7 284 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 GRAMD1AQ96CP6 724 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PTCD3Q96EY7 689 aaKnown RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 RAB33BQ9H082 229 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 EHD1Q9H4M9 534 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 SYNDIG1Q9H7V2 258 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 EPHA6Q9UF33 1036 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 TRPS1Q9UHF7 1281 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 TRAF6Q9Y4K3 522 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 DNAJC15Q9Y5T4 150 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ADAMTS20P59510 1910 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 COL27A1Q8IZC6 1860 aaPredicted RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 KCNE1BA0A087WTH5 132 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 FEZF1A0PJY2 475 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 TLCD2A6NGC4 264 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PRAMEF10O60809 474 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CPNE6O95741 557 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 JUNP05412 331 aaKnown RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 FGF4P08620 206 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 UROSP10746 265 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ST6GAL1P15907 406 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 HMOX2P30519 316 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 HNF4AP41235 474 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CASP2P42575 452 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 SF3A3Q12874 501 aaKnown RBP eCLIP6.58□□□□□ -1.361e-7■■■□□ 16.1
SCAF4-204ENST00000467731 KANK2Q63ZY3 851 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ADNP2Q6IQ32 1131 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ZNF425Q6IV72 752 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 WDR74Q6RFH5 385 aaPredicted RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PLXDC1Q8IUK5 500 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CLYBLQ8N0X4 340 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 CHCHD4Q8N4Q1 142 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 OR4K1Q8NGD4 311 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 WDR34Q96EX3 536 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 ZDHHC12Q96GR4 267 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 FCRL4Q96PJ5 515 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 HBEGFQ99075 208 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 EFCAB11Q9BUY7 163 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 VCXQ9H320 206 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 LRRN3Q9H3W5 708 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 DCAF16Q9NXF7 216 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 MN1Q10571 1320 aaPredicted RBP6.58□□□□□ -1.36
SCAF4-204ENST00000467731 SCN3AQ9NY46 2000 aa6.58□□□□□ -1.36
SCAF4-204ENST00000467731 FREM2Q5SZK8 3169 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 IGHV5-51A0A0C4DH38 117 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 GMNCA6NCL1 334 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 HAT1O14929 419 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 C9P02748 559 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 GP1BAP07359 652 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 ACADVLP49748 655 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 ZIC1Q15915 447 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 UGT3A2Q3SY77 523 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 LACTB2Q53H82 288 aaPredicted RBP6.57□□□□□ -1.36
SCAF4-204ENST00000467731 PAGE2BQ5JRK9 111 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 FCRL6Q6DN72 434 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 CGB2Q6NT52 195 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 FIGLAQ6QHK4 219 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 ZNF574Q6ZN55 896 aaPredicted RBP6.57□□□□□ -1.36
SCAF4-204ENST00000467731 PIP4P1Q86T03 277 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 KIAA2013Q8IYS2 634 aa6.57□□□□□ -1.36
SCAF4-204ENST00000467731 MTFMTQ96DP5 389 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms