RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 GOLGA7Q7Z5G4 137 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 TDRPQ86YL5 185 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.09□□□□□ -0.63
CUX1-207ENST00000465461 PRSS58Q8IYP2 241 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 C4orf33Q8N1A6 199 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 OR9A4Q8NGU2 314 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 UBTD2Q8WUN7 234 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 EXTL1Q92935 676 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 MMABQ96EY8 250 aaPredicted RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 NSUN5Q96P11 429 aaKnown RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 MRPL57Q9BQC6 102 aaKnown RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 EFHD1Q9BUP0 239 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 GPR87Q9BY21 358 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 NLNQ9BYT8 704 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 AICDAQ9GZX7 198 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 MRPL46Q9H2W6 279 aaKnown RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 ZNF304Q9HCX3 659 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 ENAMQ9NRM1 1142 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 GPRC5BQ9NZH0 403 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 CTSFQ9UBX1 484 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 ZFP69BQ9UJL9 534 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 TCFL5Q9UL49 500 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 EMCNQ9ULC0 261 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 ZNF490Q9ULM2 529 aaPredicted RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 PTRH2Q9Y3E5 179 aaKnown RBP11.09□□□□□ -0.63
CUX1-207ENST00000465461 ANGPTL3Q9Y5C1 460 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 PCDHGA6Q9Y5G7 932 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 SCN3AQ9NY46 2000 aa11.09□□□□□ -0.63
CUX1-207ENST00000465461 PTPRQQ9UMZ3 2332 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 ANKRD11Q6UB99 2663 aaPredicted RBP11.08□□□□□ -0.64
CUX1-207ENST00000465461 EPG5Q9HCE0 2579 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 ZNF860A6NHJ4 632 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 A8MT66 165 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 C4orf51C9J302 202 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 C9J4A7 227 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 SGK494L7N484 410 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 MASP2O00187 686 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 E2F3O00716 465 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 SMIM24O75264 130 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 CDH16O75309 829 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 SH3BGRLO75368 114 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
CUX1-207ENST00000465461 RAB40ALP0C0E4 278 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 RAB8AP61006 207 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 IRF8Q02556 426 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 HYAL2Q12891 473 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 GTF2H2Q13888 395 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 PCBP2Q15366 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
CUX1-207ENST00000465461 VWA2Q5GFL6 755 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 TMEM214Q6NUQ4 689 aaKnown RBP11.08□□□□□ -0.64
CUX1-207ENST00000465461 GTF2H2CQ6P1K8 395 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 OVCH1Q7RTY7 1134 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 VN1R5Q7Z5H4 357 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 PDSS2Q86YH6 399 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 RNF175Q8N4F7 328 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 CAMKVQ8NCB2 501 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 ACMSDQ8TDX5 336 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 CREB3L4Q8TEY5 395 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 SNRNP27Q8WVK2 155 aaKnown RBP11.08□□□□□ -0.64
CUX1-207ENST00000465461 CCT6BQ92526 530 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 CDK15Q96Q40 435 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 DPH2Q9BQC3 489 aaPredicted RBP11.08□□□□□ -0.64
CUX1-207ENST00000465461 MESP1Q9BRJ9 268 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 SARGQ9BW04 601 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 CAPS2Q9BXY5 557 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 PKD1L2Q7Z442 2459 aa11.08□□□□□ -0.64
CUX1-207ENST00000465461 PCSK5Q92824 1860 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 A0A0G2JN53 185 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 PPP6CO00743 305 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TXNDC9O14530 226 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 DLX3O60479 287 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 UMODP07911 640 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 SLC35G6P0C7Q6 338 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 ZNF888P0CJ79 500 aaPredicted RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 PCNAP12004 261 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 EPB42P16452 691 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 KRT4P19013 534 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 FBLP22087 321 aaKnown RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 OTX2P32243 289 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 AHRP35869 848 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 PIK3CGP48736 1102 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 EMP3P54852 163 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 CDH13P55290 713 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 OLR1P78380 273 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 NKG7Q16617 165 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TBR1Q16650 682 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 NDUFA9Q16795 377 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 LINC00303Q3SY05 128 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 GARNL3Q5VVW2 1013 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 PCSK4Q6UW60 755 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 SYVN1Q86TM6 617 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 LAPTM4BQ86VI4 370 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 MYLK4Q86YV6 388 aaPredicted RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 KRT78Q8N1N4 520 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 MREGQ8N565 214 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TBC1D19Q8N5T2 526 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms