RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 ADCK2Q7Z695 626 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 D2HGDHQ8N465 521 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 GBP7Q8N8V2 638 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 TTLQ8NG68 377 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 C11orf24Q96F05 449 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 GFM1Q96RP9 751 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 HBEGFQ99075 208 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 ZFYVE21Q9BQ24 234 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 EBF4Q9BQW3 602 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 ACPTQ9BZG2 426 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 AICDAQ9GZX7 198 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 NSRP1Q9H0G5 558 aaKnown RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-202ENST00000463060 DMRT3Q9NQL9 472 aa13.72□□□□□ -0.21
COL6A1-202ENST00000463060 LOC105369274A0A096LPK9 316 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 LOC102723532A0A0G2JNH3 316 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 D6RAR5 112 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 H3BMH7 237 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 SLC28A1O00337 649 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 PCNAP12004 261 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 PDX1P52945 283 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.21
COL6A1-202ENST00000463060 HSD11B2P80365 405 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 E2F1Q01094 437 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 KIAA0040Q15053 153 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
COL6A1-202ENST00000463060 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 DEPDC1Q5TB30 811 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 CDCP2Q5VXM1 449 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
COL6A1-202ENST00000463060 OR4N4Q8N0Y3 316 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 TRPV3Q8NET8 790 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 NT5CQ8TCD5 201 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 ACTRT2Q8TDY3 377 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 OR52B2Q96RD2 323 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 MS4A8Q9BY19 250 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 KLHL3Q9UH77 587 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.21
COL6A1-202ENST00000463060 A0A0J9YVX5 310 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ATP6AP2A0A1C7CYW4 349 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ANKDD1BA6NHY2 528 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 A8MU76 341 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 H0YGG7 62 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 VPS4BO75351 444 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ATP6AP2O75787 350 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 CTSBP07858 339 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SERPINA6P08185 405 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SMIM10L1P0DMW3 83 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 EPHA3P29320 983 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ARF3P61204 181 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 HMGCS1Q01581 520 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 TRA2AQ13595 282 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 PWP1Q13610 501 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 CUL3Q13618 768 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ZC3H12BQ5HYM0 836 aaKnown RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SLCO6A1Q86UG4 719 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 DDIASQ8IXT1 998 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ARHGEF39Q8N4T4 335 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 TBC1D19Q8N5T2 526 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 NETO1Q8TDF5 533 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 CMTM7Q96FZ5 175 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SMIM10Q96HG1 83 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 CCDC74BQ96LY2 380 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 CCDC28BQ9BUN5 200 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 TMEM120AQ9BXJ8 343 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SLC6A16Q9GZN6 736 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 PFDN4Q9NQP4 134 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 SIRT5Q9NXA8 310 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 VPS29Q9UBQ0 182 aa13.7□□□□□ -0.22
COL6A1-202ENST00000463060 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
COL6A1-202ENST00000463060 ADAMTS20P59510 1910 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 A0A0G2JND7 137 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 LRIT2A6NDA9 550 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 P2RX6O15547 441 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 RGS14O43566 566 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 GFRA3O60609 400 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 RFPL3O75679 317 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 RASSF9O75901 435 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 RSL1D1O76021 490 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 TGFB1P01137 390 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 FOLR1P15328 257 aa13.69□□□□□ -0.22
COL6A1-202ENST00000463060 HNRNPH1P31943 449 aaKnown RBP13.69□□□□□ -0.22
COL6A1-202ENST00000463060 PPM1FP49593 454 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms