RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SLC13A3Q8WWT9 602 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 MR1Q95460 341 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 FAM111AQ96PZ2 611 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 NDC1Q9BTX1 674 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 SLC7A5P2Q9GIP4 190 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 CHST8Q9H2A9 424 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 NOL11Q9H8H0 719 aaKnown RBP13.34□□□□□ -0.27
HDLBP-229ENST00000460826 TMBIM4Q9HC24 238 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 SEMA4BQ9NPR2 832 aaPredicted RBP13.34□□□□□ -0.27
HDLBP-229ENST00000460826 SENP1Q9P0U3 644 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 NDOR1Q9UHB4 597 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 SRPK3Q9UPE1 567 aa13.34□□□□□ -0.27
HDLBP-229ENST00000460826 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
HDLBP-229ENST00000460826 DSCR3O14972 297 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 H2AFYO75367 372 aaKnown RBP13.33□□□□□ -0.28
HDLBP-229ENST00000460826 SERPIND1P05546 499 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CAPN1P07384 714 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CPA3P15088 417 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 WT1P19544 449 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-229ENST00000460826 IMPDH1P20839 514 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ALAS2P22557 587 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 F8A1P23610 371 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CXCR2P25025 360 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 AHRP35869 848 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ARSFP54793 590 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 HERVK_113P63132 956 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 HYAL2Q12891 473 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 TRAF3Q13114 568 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 SLC9A5Q14940 896 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 PCLAFQ15004 111 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 FAM198BQ6UWH4 519 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.28
HDLBP-229ENST00000460826 SLC22A9Q8IVM8 553 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 KRT78Q8N1N4 520 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 TBC1D19Q8N5T2 526 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 RDH11Q8TC12 318 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CREB3L4Q8TEY5 395 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 L3HYPDHQ96EM0 354 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CDK15Q96Q40 435 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 DPH1Q9BZG8 443 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 IQCGQ9H095 443 aaKnown RBP13.33□□□□□ -0.28
HDLBP-229ENST00000460826 NT5DC2Q9H857 520 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 SLC22A11Q9NSA0 550 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 TXLNGQ9NUQ3 528 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 COPG2Q9UBF2 871 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 CROTQ9UKG9 612 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 PADI1Q9ULC6 663 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 RNF11Q9Y3C5 154 aa13.33□□□□□ -0.28
HDLBP-229ENST00000460826 A0A1B0GX78 115 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 SRRM3A6NNA2 597 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 C4orf51C9J302 202 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 RRP8O43159 456 aaKnown RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 NDUFS4O43181 175 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 FOXS1O43638 330 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 KATNA1O75449 491 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 SUPT7LO94864 414 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 TBX6O95947 436 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 KLK3P07288 261 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 LIFP15018 202 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 CCR10P46092 362 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 OR1D4P47884 311 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 PIK3CGP48736 1102 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 CCNG1P51959 295 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 TLE3Q04726 772 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 CLCQ05315 142 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 MPP2Q14168 576 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 MUM1Q2TAK8 710 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 FAM214AQ32MH5 1076 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 YOD1Q5VVQ6 348 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 TMEM214Q6NUQ4 689 aaKnown RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 PRSS41Q7RTY9 318 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 HDXQ7Z353 690 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 MYLK4Q86YV6 388 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-229ENST00000460826 C10orf107Q8IVU9 208 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 TMEM151BQ8IW70 566 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 SHISA5Q8N114 240 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 L3MBTL4Q8NA19 623 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 NT5CQ8TCD5 201 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 PROKR1Q8TCW9 393 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 TRPC4APQ8TEL6 797 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 ARL8AQ96BM9 186 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 MECRQ9BV79 373 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 GSTO2Q9H4Y5 243 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 KLHL31Q9H511 634 aa13.32□□□□□ -0.28
HDLBP-229ENST00000460826 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms