RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TM9SF4Q92544 642 aa21.8■■□□□ 1.08
PTPN4-208ENST00000460289 TSNARE1Q96NA8 513 aa21.8■■□□□ 1.08
PTPN4-208ENST00000460289 AIF1LQ9BQI0 150 aa21.8■■□□□ 1.08
PTPN4-208ENST00000460289 CAPS2Q9BXY5 557 aa21.8■■□□□ 1.08
PTPN4-208ENST00000460289 UNKQ9C0B0 810 aaKnown RBP21.8■■□□□ 1.08
PTPN4-208ENST00000460289 ZFP69BQ9UJL9 534 aa21.8■■□□□ 1.08
PTPN4-208ENST00000460289 TTLL8A6PVC2 850 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 MASP2O00187 686 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 FFAR3O14843 346 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 GPR42O15529 346 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 NDUFS4O43181 175 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 FAM155BO75949 473 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 HPP00738 406 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 GNAZP19086 355 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 CRABP2P29373 138 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 AHRP35869 848 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 MAT1AQ00266 395 aaKnown RBP21.79■■□□□ 1.08
PTPN4-208ENST00000460289 HERC3Q15034 1050 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 SYT16Q17RD7 645 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 IGFL3Q6UXB1 125 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 RAPH1Q70E73 1250 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 GPSM1Q86YR5 675 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 KLHDC8AQ8IYD2 350 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 KIF18AQ8NI77 898 aa21.79■■□□□ 1.08
PTPN4-208ENST00000460289 TRIM44Q96DX7 344 aaPredicted RBP21.79■■□□□ 1.08
PTPN4-208ENST00000460289 CNOT10Q9H9A5 744 aaKnown RBP21.79■■□□□ 1.08
PTPN4-208ENST00000460289 TNRC6AQ8NDV7 1962 aaKnown RBP21.79■■□□□ 1.08
PTPN4-208ENST00000460289 NCF1BA6NI72 391 aaPredicted RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 NCF1CA8MVU1 366 aaPredicted RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 H2AFYO75367 372 aaKnown RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 WDR47O94967 919 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 BMP10O95393 424 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 NCF1P14598 390 aaPredicted RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 IL1RNP18510 177 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 SCTRP47872 440 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 SLC6A12P48065 614 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 SKP1P63208 163 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 FOXK1P85037 733 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 RGS1Q08116 209 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 SLMAPQ14BN4 828 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 NIPAL1Q6NVV3 410 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 JMJD6Q6NYC1 403 aaPredicted RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 NDUFAF7Q7L592 441 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 PRSS41Q7RTY9 318 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 RELL1Q8IUW5 271 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 ZC3H7AQ8IWR0 971 aaKnown RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 PARP9Q8IXQ6 854 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 NOA1Q8NC60 698 aaKnown RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 ZNF740Q8NDX6 193 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 OR51Q1Q8NH59 317 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 ZCCHC10Q8TBK6 192 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 KIAA1191Q96A73 305 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 CYTH2Q99418 400 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 LHPPQ9H008 270 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 DMGDHQ9UI17 866 aaKnown RBP21.78■■□□□ 1.08
PTPN4-208ENST00000460289 MKL2Q9ULH7 1088 aa21.78■■□□□ 1.08
PTPN4-208ENST00000460289 SGK494L7N484 410 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 SERPIND1P05546 499 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 CYC1P08574 325 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 GGT5P36269 586 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 GDF5P43026 501 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 MLLT10P55197 1068 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 SNRPNP63162 240 aaKnown RBP21.77■■□□□ 1.08
PTPN4-208ENST00000460289 REEP5Q00765 189 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 AGAP7PQ5VUJ5 663 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 SULT1C3Q6IMI6 304 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 CCDC91Q7Z6B0 441 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 TMPRSS11BQ86T26 416 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 TBC1D1Q86TI0 1168 aaPredicted RBP21.77■■□□□ 1.08
PTPN4-208ENST00000460289 RBMXL3Q8N7X1 1067 aaKnown RBP21.77■■□□□ 1.08
PTPN4-208ENST00000460289 TRPV3Q8NET8 790 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 NT5CQ8TCD5 201 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 METTL21AQ8WXB1 218 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 IFT81Q8WYA0 676 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 PNPLA2Q96AD5 504 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 C8orf44Q96CB5 159 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 AGAP4Q96P64 663 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 NMRAL1Q9HBL8 299 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 SLAMF7Q9NQ25 335 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 NAALAD2Q9Y3Q0 740 aa21.77■■□□□ 1.08
PTPN4-208ENST00000460289 TENM4Q6N022 2769 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 NSG1A0A0A6YYJ2 146 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 A0A1W2PQ72 361 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 URADA6NGE7 173 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 ALOX12BO75342 701 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 IL10P22301 178 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 RBBP5Q15291 538 aaKnown RBP21.76■■□□□ 1.07
PTPN4-208ENST00000460289 OR4D1Q15615 310 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 IGFBP7Q16270 282 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 ABHD13Q7L211 337 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 ZADH2Q8N4Q0 377 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 STAG3L4Q8TBR4 150 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 THOC3Q96J01 351 aaKnown RBP21.76■■□□□ 1.07
PTPN4-208ENST00000460289 MFRPQ9BY79 579 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 SPNS1Q9H2V7 528 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 ZNF160Q9HCG1 818 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 WWOXQ9NZC7 414 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 GPRC5BQ9NZH0 403 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 CD274Q9NZQ7 290 aa21.76■■□□□ 1.07
PTPN4-208ENST00000460289 RNF112Q9ULX5 631 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms