RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 ENPP6Q6UWR7 440 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 DET1Q7L5Y6 550 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CALHM3Q86XJ0 350 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 MICU2Q8IYU8 434 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-203ENST00000460097 RASSF5Q8WWW0 418 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 ZHX1-C8orf76Q96EF9 292 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 ZBTB18Q99592 522 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 TM6SF2Q9BZW4 377 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CATSPERZQ9NTU4 200 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 OPTCQ9UBM4 332 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 CRYL1Q9Y2S2 319 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 TIMM22Q9Y584 194 aa15.23■□□□□ 0.03
CMTM3-203ENST00000460097 EVPLLA8MZ36 301 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 HAT1O14929 419 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 DPM1O60762 260 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 ZNF217O75362 1048 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 KCNK2O95069 426 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 GOT2P00505 430 aaKnown RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 DNTTP04053 509 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 TCEA1P23193 301 aaKnown RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 IGFBP5P24593 272 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 CNR2P34972 360 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 RHOAP61586 193 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 CYP4F3Q08477 520 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 VAC14Q08AM6 782 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 MAD2L1Q13257 205 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 RAPSNQ13702 412 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PCSK7Q16549 785 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 TOR1AIP1Q5JTV8 583 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 CATSPEREQ5SY80 951 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 MLIPQ5VWP3 458 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 ZC3H14Q6PJT7 736 aaKnown RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 DPY19L3Q6ZPD9 716 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 USP43Q70EL4 1123 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 AMER2Q8N7J2 671 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 GALNT6Q8NCL4 622 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 OR2AP1Q8NGE2 309 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 OR4L1Q8NH43 312 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PSMA8Q8TAA3 256 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 SLC13A3Q8WWT9 602 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 FIG4Q92562 907 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PROX1Q92786 737 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 ATOH1Q92858 354 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 TP53INP1Q96A56 240 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PPP3R2Q96LZ3 170 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PITX2Q99697 317 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 ALOXE3Q9BYJ1 711 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 NEK6Q9HC98 313 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 CCDC177Q9NQR7 707 aaPredicted RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 ITM2CQ9NQX7 267 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 MKLN1Q9UL63 735 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 NDRG4Q9ULP0 352 aaKnown RBP15.22■□□□□ 0.03
CMTM3-203ENST00000460097 PCDHB14Q9Y5E9 798 aa15.22■□□□□ 0.03
CMTM3-203ENST00000460097 TRBV5-3A0A0A0MS03 114 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 EFCAB9A8MZ26 197 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 SLC4A1P02730 911 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 IL6P05231 212 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 AKT1P31749 480 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 CD86P42081 329 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 DEFA1P59665 94 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 DEFA3P59666 94 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 ARPC4P59998 168 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 NCS1P62166 190 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 TRAF3Q13114 568 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 PROX2Q3B8N5 592 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 SETMARQ53H47 684 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-203ENST00000460097 RUNDC3AQ59EK9 446 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 FAM46CQ5VWP2 391 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 TMEM236Q5W0B7 351 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 FAM219BQ5XKK7 198 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 STEAP3Q658P3 488 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 KDM4DQ6B0I6 523 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 TTC23LQ6PF05 361 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 CACUL1Q86Y37 369 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 SNX29P2Q8IUI4 249 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.21■□□□□ 0.03
CMTM3-203ENST00000460097 FAM86B1Q8N7N1 296 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 POC5Q8NA72 575 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 CHST14Q8NCH0 376 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 ARRDC2Q8TBH0 407 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 BRSK1Q8TDC3 778 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 GTF2H4Q92759 462 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 FAM162AQ96A26 154 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 TBATAQ96M53 351 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 CINPQ9BW66 212 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-203ENST00000460097 ITPAQ9BY32 194 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 DCSTAMPQ9H295 470 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 TP63Q9H3D4 680 aaPredicted RBP15.21■□□□□ 0.03
CMTM3-203ENST00000460097 SCML1Q9UN30 329 aa15.21■□□□□ 0.03
CMTM3-203ENST00000460097 NYNRINQ9P2P1 1898 aaKnown RBP15.21■□□□□ 0.03
CMTM3-203ENST00000460097 PNMA8CA0A1B0GUJ8 204 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 E2F3O00716 465 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 HRO43593 1189 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 XPNPEP2O43895 674 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 POP4O95707 220 aaKnown RBP15.21■□□□□ 0.02
CMTM3-203ENST00000460097 MT-ND2P03891 347 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 TRAPPC2P0DI81 140 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 TRAPPC2BP0DI82 140 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms