RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 MKL2Q9ULH7 1088 aa20.11■□□□□ 0.81
HMGB3-205ENST00000455596 UBR5O95071 2799 aaPredicted RBP20.1■□□□□ 0.81
HMGB3-205ENST00000455596 A0A1W2PQ72 361 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 FAM159BA6NKW6 160 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 BMP10O95393 424 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 GP5P40197 560 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 HNMTP50135 292 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 GPX6P59796 221 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 EEF1A2Q05639 463 aaKnown RBP20.1■□□□□ 0.81
HMGB3-205ENST00000455596 USP10Q14694 798 aaKnown RBP20.1■□□□□ 0.81
HMGB3-205ENST00000455596 TSNQ15631 228 aaKnown RBP20.1■□□□□ 0.81
HMGB3-205ENST00000455596 IQCKQ8N0W5 287 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 GALNT11Q8NCW6 608 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 OR51Q1Q8NH59 317 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 TSNARE1Q96NA8 513 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 GPR22Q99680 433 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 DERL2Q9GZP9 239 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 CAB39LQ9H9S4 337 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 MAP10Q9P2G4 905 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 SLC22A14Q9Y267 594 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 SLC22A7Q9Y694 548 aa20.1■□□□□ 0.81
HMGB3-205ENST00000455596 IGHV1-45A0A0A0MS14 117 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 SGK494L7N484 410 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 NDUFS4O43181 175 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 PWP1Q13610 501 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 PRR30Q53SZ7 412 aaPredicted RBP20.09■□□□□ 0.81
HMGB3-205ENST00000455596 MFSD4BQ5TF39 518 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 IGFL2Q6UWQ7 119 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 Q6ZS92 163 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 CTAGE3PQ8IX95 158 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 KBTBD2Q8IY47 623 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 C16orf45Q96MC5 204 aaPredicted RBP20.09■□□□□ 0.81
HMGB3-205ENST00000455596 EPS8L2Q9H6S3 715 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 PELI2Q9HAT8 420 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 RIC8BQ9NVN3 520 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 HCN3Q9P1Z3 774 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 KCNE2Q9Y6J6 123 aa20.09■□□□□ 0.81
HMGB3-205ENST00000455596 LOC102723996A0A087X1L8 192 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 WISP3O95389 354 aaPredicted RBP20.08■□□□□ 0.81
HMGB3-205ENST00000455596 CYC1P08574 325 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 STMN1P16949 149 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 MAGEA4P43358 317 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 XCR1P46094 333 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 HERC3Q15034 1050 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 TRADDQ15628 312 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 C8orf74Q6P047 294 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 TMEM205Q6UW68 189 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 ZDHHC24Q6UX98 284 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 ISLR2Q6UXK2 745 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 TMPRSS11BQ86T26 416 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 ZNF740Q8NDX6 193 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 PPP4R1Q8TF05 950 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 METTL21AQ8WXB1 218 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 WDR77Q9BQA1 342 aaPredicted RBP20.08■□□□□ 0.81
HMGB3-205ENST00000455596 AIF1LQ9BQI0 150 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 ZFP69BQ9UJL9 534 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 NAALAD2Q9Y3Q0 740 aa20.08■□□□□ 0.81
HMGB3-205ENST00000455596 PHGDHO43175 533 aaKnown RBP20.07■□□□□ 0.8
HMGB3-205ENST00000455596 RDH16O75452 317 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 JRKO75564 520 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 URI1O94763 535 aaPredicted RBP20.07■□□□□ 0.8
HMGB3-205ENST00000455596 KLHL18O94889 574 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 C1QAP02745 245 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SERPIND1P05546 499 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 CCDC166P0CW27 439 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 C8orf89P0DMQ9 161 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 STX2P32856 288 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SPRP35270 261 aaPredicted RBP20.07■□□□□ 0.8
HMGB3-205ENST00000455596 AHRP35869 848 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SCTRP47872 440 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 REEP5Q00765 189 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SLC7A5Q01650 507 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 RGS1Q08116 209 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 UBAP2LQ14157 1087 aaKnown RBP20.07■□□□□ 0.8
HMGB3-205ENST00000455596 TGFBIQ15582 683 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 KBTBD12Q3ZCT8 623 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 MINDY4Q4G0A6 757 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 GRTP1Q5TC63 336 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 NXPE4Q6UWF7 544 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 PDSS2Q86YH6 399 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 NT5CQ8TCD5 201 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 RHBDF1Q96CC6 855 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 MOCOSQ96EN8 888 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SLC29A3Q9BZD2 475 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 UNKQ9C0B0 810 aaKnown RBP20.07■□□□□ 0.8
HMGB3-205ENST00000455596 VN1R1Q9GZP7 353 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 ZNF700Q9H0M5 742 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 SPNS1Q9H2V7 528 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 LRRC4CQ9HCJ2 640 aa20.07■□□□□ 0.8
HMGB3-205ENST00000455596 NBASA2RRP1 2371 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 NCF1BA6NI72 391 aaPredicted RBP20.06■□□□□ 0.8
HMGB3-205ENST00000455596 NCF1CA8MVU1 366 aaPredicted RBP20.06■□□□□ 0.8
HMGB3-205ENST00000455596 WDR47O94967 919 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 PRR35P0CG20 571 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 NCF1P14598 390 aaPredicted RBP20.06■□□□□ 0.8
HMGB3-205ENST00000455596 GNLYP22749 145 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 UQCRFS1P47985 274 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 EFNA3P52797 238 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 ATP6V0D1P61421 351 aa20.06■□□□□ 0.8
HMGB3-205ENST00000455596 SKP1P63208 163 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms