RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PPP4R1Q8TF05 950 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 NEIL2Q969S2 332 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 TSNARE1Q96NA8 513 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 OR4K3Q96R72 315 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 CPNE1Q99829 537 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 MACROD1Q9BQ69 325 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 SARGQ9BW04 601 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 PHACTR1Q9C0D0 580 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-203ENST00000454233 GRHL1Q9NZI5 618 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 HCN3Q9P1Z3 774 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 C19orf25Q9UFG5 118 aaPredicted RBP10.12□□□□□ -0.79
DDX39A-203ENST00000454233 IKZF3Q9UKT9 509 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 OARD1Q9Y530 152 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 SLC22A7Q9Y694 548 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 KCNE2Q9Y6J6 123 aa10.12□□□□□ -0.79
DDX39A-203ENST00000454233 DOCK10Q96BY6 2186 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 LOC102723996A0A087X1L8 192 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 IGHV1-45A0A0A0MS14 117 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 A0A1W2PQ72 361 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 TCRBV9S1A1TA0A576 114 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 SGK494L7N484 410 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 NDUFS4O43181 175 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 PIAS1O75925 651 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 WFS1O76024 890 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 KLHL18O94889 574 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 SERPINA7P05543 415 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 PRR35P0CG20 571 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 C8orf89P0DMQ9 161 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 ICAM2P13598 275 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 GP5P40197 560 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 XCR1P46094 333 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 UQCRFS1P47985 274 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 Q0VFX4 171 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 MFAP5Q13361 173 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 USP10Q14694 798 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 HERC3Q15034 1050 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 TSNQ15631 228 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CRB2Q5IJ48 1285 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CATSPEREQ5SY80 951 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 NIPAL1Q6NVV3 410 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 TMEM205Q6UW68 189 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 IGFL2Q6UWQ7 119 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 LINC00696Q6ZRV3 163 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 RIPOR1Q6ZS17 1223 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 PRSS41Q7RTY9 318 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 TMPRSS11BQ86T26 416 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CEP97Q8IW35 865 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CTAGE3PQ8IX95 158 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CISD2Q8N5K1 135 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 DNAJB14Q8TBM8 379 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 SNRNP40Q96DI7 357 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 CNDP1Q96KN2 507 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 LMF1Q96S06 567 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 AIF1LQ9BQI0 150 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 MESP1Q9BRJ9 268 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 TUBB6Q9BUF5 446 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 VN1R1Q9GZP7 353 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 DERL2Q9GZP9 239 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 PELI2Q9HAT8 420 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 ASH1LQ9NR48 2969 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 SMYD2Q9NRG4 433 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 ZFP69BQ9UJL9 534 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 SLC22A14Q9Y267 594 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 MTO1Q9Y2Z2 717 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 NAALAD2Q9Y3Q0 740 aa10.11□□□□□ -0.79
DDX39A-203ENST00000454233 COPG1Q9Y678 874 aaKnown RBP10.11□□□□□ -0.79
DDX39A-203ENST00000454233 DYTNA2CJ06 578 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CLEC18AA5D8T8 446 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 URADA6NGE7 173 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 FAM159BA6NKW6 160 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CXorf49A8MYA2 514 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 H2AFYO75367 372 aaKnown RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 RDH16O75452 317 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 JRKO75564 520 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 WDR47O94967 919 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CCDC166P0CW27 439 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 STMN1P16949 149 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 IL10P22301 178 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 STX2P32856 288 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 SPRP35270 261 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 AHRP35869 848 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 MAGEA4P43358 317 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 SCTRP47872 440 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 AGTR2P50052 363 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 SNRPNP63162 240 aaKnown RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 REEP5Q00765 189 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 PCOLCEQ15113 449 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 TLR1Q15399 786 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 FHL5Q5TD97 284 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 NXPE4Q6UWF7 544 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CLEC18BQ6UXF7 455 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 ABHD13Q7L211 337 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 ZNF572Q7Z3I7 529 aaPredicted RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CPEB2Q7Z5Q1 589 aaKnown RBP10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CUZD1Q86UP6 607 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 TCAIMQ8N3R3 496 aa10.1□□□□□ -0.79
DDX39A-203ENST00000454233 CLEC18CQ8NCF0 446 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms