RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ATG2AQ2TAZ0 1938 aa11.33□□□□□ -0.6
VTA1-203ENST00000452973 FAM220BPB1ANY3 271 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 UPK1AO00322 258 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 PI15O43692 258 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 ALBP02768 609 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 GSTT1P30711 240 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 HPCAL1P37235 193 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 GZMMP51124 257 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 ARSFP54793 590 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 TAS2R50P59544 299 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 C2orf80Q0P641 193 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 CYBRD1Q53TN4 286 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 ADAMTSL4Q6UY14 1074 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 CALHM3Q86XJ0 350 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 OR4A15Q8NGL6 344 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 CIDECQ96AQ7 238 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 REXO5Q96IC2 774 aaKnown RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 TPD52L3Q96J77 140 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 FERD3LQ96RJ6 166 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 RAPGEFL1Q9UHV5 662 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 MYO1GB0I1T2 1018 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 H3BNH8 94 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 H7BY64 318 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 hCG_2039718K7EN88 272 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 HSD3B1P14060 373 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 KELP23276 732 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 HSD3B2P26439 372 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 TRPC1P48995 793 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 KRT33BQ14525 404 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 SLC36A3Q495N2 470 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 ZNF385BQ569K4 471 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.32□□□□□ -0.6
VTA1-203ENST00000452973 VTCN1Q7Z7D3 282 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 DCUN1D3Q8IWE4 304 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 LRRC56Q8IYG6 542 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 FBXO15Q8NCQ5 510 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 OR8J2Q8NGG1 315 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 OR5AK3PQ8NH89 298 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 DNAJB8Q8NHS0 232 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 EZH1Q92800 747 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 C11orf24Q96F05 449 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 C12orf66Q96MD2 445 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 PRAP1Q96NZ9 151 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 FAM120CQ9NX05 1096 aaKnown RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 FZD4Q9ULV1 537 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 GPSM3Q9Y4H4 160 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 A0A1W2PQU0 124 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 SERTM1A2A2V5 107 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 K7EQS6 105 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 KCNK5O95279 499 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 PABPC4LP0CB38 370 aaKnown RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 C5AR1P21730 350 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 IDSP22304 550 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 CRATP43155 626 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 ASMTP46597 345 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 C17orf64Q86WR6 236 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 CDCA3Q99618 268 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 CLK4Q9HAZ1 481 aaKnown RBP11.32□□□□□ -0.6
VTA1-203ENST00000452973 CLDND1Q9NY35 253 aa11.32□□□□□ -0.6
VTA1-203ENST00000452973 PRAMEF33A0A0G2JMD5 474 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 A0A0G2JN53 185 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 HOXB9P17482 250 aaPredicted RBP11.31□□□□□ -0.6
VTA1-203ENST00000452973 CAPGP40121 348 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 GAB1Q13480 694 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 METRNLQ641Q3 311 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 TMEM179BQ7Z7N9 219 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 TMIGD2Q96BF3 282 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 PYURFQ96I23 114 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 FCRL1Q96LA6 429 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 DNAJB9Q9UBS3 223 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ACSL6Q9UKU0 697 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 EXO1Q9UQ84 846 aaKnown RBP11.31□□□□□ -0.6
VTA1-203ENST00000452973 ANKDD1BA6NHY2 528 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 PDZK1P1A8MUH7 402 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 HS6ST1O60243 411 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 PRMT3O60678 531 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 C6orf47O95873 294 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ALDH9A1P49189 494 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ZNF33BQ06732 778 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 VMACQ2NL98 169 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
VTA1-203ENST00000452973 ZNF776Q68DI1 518 aaPredicted RBP11.31□□□□□ -0.6
VTA1-203ENST00000452973 UNC5DQ6UXZ4 953 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ZNF852Q6ZMS4 543 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 RD3Q7Z3Z2 195 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 JPH3Q8WXH2 748 aaPredicted RBP11.31□□□□□ -0.6
VTA1-203ENST00000452973 ELSPBP1Q96BH3 223 aa11.31□□□□□ -0.6
VTA1-203ENST00000452973 F2RL3Q96RI0 385 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms