RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 C14orf105Q9NVL8 296 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 MOCS1Q9NZB8 636 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 MAP4K5Q9Y4K4 846 aa9.18□□□□□ -0.94
USP54-207ENST00000451492 PRRC2CQ9Y520 2896 aaKnown RBP9.18□□□□□ -0.94
USP54-207ENST00000451492 ASH1LQ9NR48 2969 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 TCRBV9S1A1TA0A576 114 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 IPO13O94829 963 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 WDR47O94967 919 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 NSA2O95478 260 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 ONECUT2O95948 504 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 HPP00738 406 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 ENO2P09104 434 aaPredicted RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 ZNF888P0CJ79 500 aaPredicted RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 HRH2P25021 359 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 SLC26A3P40879 764 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 GDF5P43026 501 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 XCR1P46094 333 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 ST13P50502 369 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 EMP3P54852 163 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 GPX6P59796 221 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 CKAP4Q07065 602 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 MRPL49Q13405 166 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 FRG1Q14331 258 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 USP10Q14694 798 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 RBBP5Q15291 538 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 AGAP7PQ5VUJ5 663 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 THOC6Q86W42 341 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 PDSS2Q86YH6 399 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 IQCKQ8N0W5 287 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 ARHGEF39Q8N4T4 335 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 PPM1NQ8N819 430 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 MFSD9Q8NBP5 474 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 OR5T3Q8NGG3 340 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 OR56A3Q8NH54 315 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 BRIX1Q8TDN6 353 aaKnown RBP9.17□□□□□ -0.94
USP54-207ENST00000451492 SLC5A11Q8WWX8 675 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 PEX11GQ96HA9 241 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 AGAP4Q96P64 663 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 RBBP8Q99708 897 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 EPS8L2Q9H6S3 715 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 ENAMQ9NRM1 1142 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 WWOXQ9NZC7 414 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 C5AR2Q9P296 337 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 PTGFRNQ9P2B2 879 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 SLC22A14Q9Y267 594 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 B3GNT3Q9Y2A9 372 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 NAALAD2Q9Y3Q0 740 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 OARD1Q9Y530 152 aa9.17□□□□□ -0.94
USP54-207ENST00000451492 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 IGHV1-45A0A0A0MS14 117 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CTAGE15A4D2H0 777 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CLGNO14967 610 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 EIF3HO15372 352 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP54-207ENST00000451492 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 KLHL18O94889 574 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CCDC166P0CW27 439 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 C8orf89P0DMQ9 161 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 RAB8AP61006 207 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 REEP5Q00765 189 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 POU4F1Q01851 419 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 BMPR2Q13873 1038 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 FAM53BQ14153 422 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 NR6A1Q15406 480 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 DEFB134Q4QY38 66 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 ZDHHC24Q6UX98 284 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 RAPH1Q70E73 1250 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CMC1Q7Z7K0 106 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 ADAMTSL2Q86TH1 951 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CTAGE6Q86UF2 777 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CUZD1Q86UP6 607 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 HPS6Q86YV9 775 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 KBTBD2Q8IY47 623 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 TBC1D19Q8N5T2 526 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 OR51Q1Q8NH59 317 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 FBF1Q8TES7 1133 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 METTL21AQ8WXB1 218 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CCT6BQ92526 530 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 SNRNP40Q96DI7 357 aaKnown RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 CPNE1Q99829 537 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 WDR77Q9BQA1 342 aaPredicted RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 LRRC1Q9BTT6 524 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 RHBGQ9H310 441 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 ASF1BQ9NVP2 202 aa9.16□□□□□ -0.94
USP54-207ENST00000451492 NOVA2Q9UNW9 492 aaKnown RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 UTP20O75691 2785 aaKnown RBP9.16□□□□□ -0.94
USP54-207ENST00000451492 A0A0G2JN53 185 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 TRBC2A0A5B9 178 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 FAM159BA6NKW6 160 aa9.15□□□□□ -0.94
USP54-207ENST00000451492 H0YIG0 161 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms