RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 OR2L3Q8NG85 312 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 ELP5Q8TE02 316 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 PERPQ96FX8 193 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 SPATA13Q96N96 652 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 ALS2CR12Q96Q35 445 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 FCRL5Q96RD9 977 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 FSD1LQ9BXM9 530 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 SMARCAL1Q9NZC9 954 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 CTTNBP2NLQ9P2B4 639 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 ADGRE2Q9UHX3 823 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 REXO2Q9Y3B8 237 aaKnown RBP11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
AC004540.1-204ENST00000449537 KIF2AO00139 706 aaPredicted RBP11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 QSOX1O00391 747 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 FCHO1O14526 889 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 TXNDC9O14530 226 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 VPS26AO75436 327 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 CRTAMO95727 393 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 PSMB5P28074 263 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 MC4RP32245 332 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC1A1P43005 524 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC26A5P58743 744 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 KRTAP1-1Q07627 177 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 MPP3Q13368 585 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 FAM53BQ14153 422 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 GRB7Q14451 532 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 USP10Q14694 798 aaKnown RBP11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 NAA25Q14CX7 972 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 NSDHLQ15738 373 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 DCUN1D3Q8IWE4 304 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 KIF2BQ8N4N8 673 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 OXNAD1Q96HP4 312 aaPredicted RBP11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 DESI2Q9BSY9 194 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 RAB11FIP5Q9BXF6 653 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 MAK16Q9BXY0 300 aaKnown RBP11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 ZDHHC11Q9H8X9 412 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 PRSS21Q9Y6M0 314 aa11.75□□□□□ -0.53
AC004540.1-204ENST00000449537 TRBV5-4A0A0C4DH59 114 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 OR2A25A4D2G3 310 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 FAM166BA8MTA8 275 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 ACOT7O00154 380 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC16A5O15375 505 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 TUBB4AP04350 444 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 GABRA1P14867 456 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 KDELR1P24390 212 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 CSE1LP55060 971 aaKnown RBP11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 NDUFA9Q16795 377 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 WLSQ5T9L3 541 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 TTC23LQ6PF05 361 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 TRILQ7L0X0 811 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 PID1Q7Z2X4 250 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC22A16Q86VW1 577 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 TRIM58Q8NG06 486 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 OR51Q1Q8NH59 317 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 RAPGEF5Q92565 580 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 RERGQ96A58 199 aaPredicted RBP11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 DPH7Q9BTV6 452 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
AC004540.1-204ENST00000449537 A0A1B0GVC2 190 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 ARHGEF33A8MVX0 844 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 H0YIG0 161 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 CCL22O00626 93 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 APOL1O14791 398 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 PHF2O75151 1096 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 PROSCO94903 275 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 SIX3O95343 332 aaPredicted RBP11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 IGHG3P01860 377 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 STATHP02808 62 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 CMPK1P30085 196 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 XCR1P46094 333 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 OR4D2P58180 307 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 WASHC5Q12768 1159 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 CHRFAM7AQ494W8 412 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC9A4Q6AI14 798 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 MDGA2Q7Z553 956 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 CYP4Z2PQ8N1L4 340 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 ARHGEF39Q8N4T4 335 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 TMEM156Q8N614 296 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 PLPP5Q8NEB5 264 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 OR2A1Q8NGT9 310 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 OR9A4Q8NGU2 314 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC35G2Q8TBE7 412 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 MCOLN3Q8TDD5 553 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 SMPDL3BQ92485 455 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 SARAFQ96BY9 339 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 C19orf43Q9BQ61 176 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 CNPPD1Q9BV87 410 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 TIMMDC1Q9NPL8 285 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 KLHL8Q9P2G9 620 aaPredicted RBP11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 PYCARDQ9ULZ3 195 aa11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 EIF3LQ9Y262 564 aaKnown RBP11.73□□□□□ -0.53
AC004540.1-204ENST00000449537 AQP7O14520 342 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 CASKO14936 926 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms