RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SOX8P57073 446 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 TLE1Q04724 770 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 SLMAPQ14BN4 828 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 RBBP7Q16576 425 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 FBXO48Q5FWF7 155 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 MROH9Q5TGP6 573 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ATG9BQ674R7 924 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 CEP128Q6ZU80 1094 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ISCA2Q86U28 154 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 CEP112Q8N8E3 955 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 OR11G2Q8NGC1 345 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ZCCHC10Q8TBK6 192 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 KIAA1191Q96A73 305 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ESAMQ96AP7 390 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 CYTH2Q99418 400 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 FMO2Q99518 471 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 SMAD5Q99717 465 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 EPN3Q9H201 632 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 CDC42EP4Q9H3Q1 356 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ACSS3Q9H6R3 686 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 PELI2Q9HAT8 420 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 G3BP2Q9UN86 482 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF451Q9Y4E5 1061 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 SLC22A7Q9Y694 548 aa12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 IDSB3KWA1 339 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 SGK494L7N484 410 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 NDUFS4O43181 175 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 BMP10O95393 424 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ACSL3O95573 720 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 SERPIND1P05546 499 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 SLC35G6P0C7Q6 338 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 C1GALT1C1LP0DN25 315 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 VARSP26640 1264 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 AHRP35869 848 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 CSRP3P50461 194 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 REEP5Q00765 189 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 AIMP2Q13155 320 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 PWP1Q13610 501 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 BMPR2Q13873 1038 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 MYBPC3Q14896 1274 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 UAP1Q16222 522 aaPredicted RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TUBB8Q3ZCM7 444 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 NADK2Q4G0N4 442 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 CDKL4Q5MAI5 379 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 SULT1C3Q6IMI6 304 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 SLCO4C1Q6ZQN7 724 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TMPRSS11BQ86T26 416 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TBC1D1Q86TI0 1168 aaPredicted RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 PDSS2Q86YH6 399 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ZC3H7AQ8IWR0 971 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 PARP9Q8IXQ6 854 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TCAIMQ8N3R3 496 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TBC1D19Q8N5T2 526 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ANKRD53Q8N9V6 530 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 OR51Q1Q8NH59 317 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 C8orf44Q96CB5 159 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 NXNL1Q96CM4 212 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 AIF1LQ9BQI0 150 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 TMEM79Q9BSE2 394 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 FUT8Q9BYC5 575 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ALG9Q9H6U8 611 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF552Q9H707 407 aaPredicted RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 NMRAL1Q9HBL8 299 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ANKHQ9HCJ1 492 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 IGSF5Q9NSI5 407 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 C14orf105Q9NVL8 296 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 CD274Q9NZQ7 290 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ZFP69BQ9UJL9 534 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 PTBP2Q9UKA9 531 aaKnown RBP12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 RNF112Q9ULX5 631 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 ACOT9Q9Y305 439 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 NAALAD2Q9Y3Q0 740 aa12.07□□□□□ -0.48
PRPF40A-203ENST00000448428 BSNQ9UPA5 3926 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 DNAJB6O75190 326 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 H2AFYO75367 372 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 JRKO75564 520 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 C2P06681 752 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 HEXBP07686 556 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 LTA4HP09960 611 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 ACPPP15309 386 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 GNAZP19086 355 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 TFEBP19484 476 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 HSPA7P48741 367 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 EFNA3P52797 238 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 IRF9Q00978 393 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 Q0VFX4 171 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 CDC16Q13042 620 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 RBBP5Q15291 538 aaKnown RBP12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 FAAH2Q6GMR7 532 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 AFAP1L2Q8N4X5 818 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 PDPRQ8NCN5 879 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 STAG3L4Q8TBR4 150 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 NT5CQ8TCD5 201 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 VPS50Q96JG6 964 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 CNOT10Q9H9A5 744 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms