RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 APCDD1Q8J025 514 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 KLHDC1Q8N7A1 406 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 NKAIN3Q8N8D7 197 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 OR1L3Q8NH93 324 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 SUSD6Q92537 303 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 RAD54LQ92698 747 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 NDNQ99608 321 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 GTPBP2Q9BX10 602 aaKnown RBP3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 ATAD3AQ9NVI7 634 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 INTS10Q9NVR2 710 aaKnown RBP3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 POLKQ9UBT6 870 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 R4GN57 208 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 METP08581 1390 aa3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 MAP2P11137 1827 aaKnown RBP3.97□□□□□ -1.77
HMGB3P6-201ENST00000444896 ADAMTS13Q76LX8 1427 aa3.96□□□□□ -1.77
HMGB3P6-201ENST00000444896 SLIT1O75093 1534 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 MEIOCA2RUB1 952 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 SNURFLB1AK76 121 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 C2CD4DB7Z1M9 353 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 PSMD14O00487 310 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TBCAO75347 108 aaKnown RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZNF821O75541 412 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZFAND5O76080 213 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 GAS8-AS1O95177 125 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 SIX3O95343 332 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 FAM58BPP0C7Q3 252 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 PRKCIP41743 596 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 CAPZA1P52907 286 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ATP12AP54707 1039 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ROR1Q01973 937 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TRAP1Q12931 704 aaKnown RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TNK1Q13470 666 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ITGA9Q13797 1035 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TUBB2AQ13885 445 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 UGCGQ16739 394 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 FAM174BQ3ZCQ3 159 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 MPP7Q5T2T1 576 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 LCN1P1Q5VSP4 162 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 FAM91A1Q658Y4 838 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ADAM5Q6NVV9 412 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TMEM182Q6ZP80 229 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 BTN2A1Q7KYR7 527 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 G2E3Q7L622 706 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 GALNTL5Q7Z4T8 443 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 NRARPQ7Z6K4 114 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 RYBPQ8N488 228 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 NOA1Q8NC60 698 aaKnown RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 OR5AP2Q8NGF4 316 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 C9orf43Q8TAL5 461 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 SETD6Q8TBK2 473 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 HEXDCQ8WVB3 486 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 C4orf45Q96LM5 186 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 SPAG5Q96R06 1193 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TUBB2BQ9BVA1 445 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 MTMR12Q9C0I1 747 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 ACTL8Q9H568 366 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 CHST11Q9NPF2 352 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 OR6C2Q9NZP2 312 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 CHKBQ9Y259 395 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 KCNK7Q9Y2U2 307 aa3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 RIMS1Q86UR5 1692 aaKnown RBP3.96□□□□□ -1.78
HMGB3P6-201ENST00000444896 TTC21BQ7Z4L5 1316 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 TTC21AQ8NDW8 1320 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 OVOS2A0A0J9YW53 1432 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 OVOS2Q6IE36 1432 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 NALCNQ8IZF0 1738 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 KIF26BQ2KJY2 2108 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 ARHGAP23Q9P227 1491 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 ARHGEF10O15013 1369 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 A0A1W2PPW3 197 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 SLCO1B7G3V0H7 640 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 EIF5BO60841 1220 aaKnown RBP3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 IGHDP01880 384 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 VTNP04004 478 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 SERPING1P05155 500 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 PSMB4P28070 264 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 LEPRP48357 1165 aaKnown RBP3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 BMXP51813 675 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 TMEM187Q14656 261 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 CCDC6Q16204 474 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 MRGPRG-AS1Q2M3A8 158 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 CEP85LQ5SZL2 805 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 PWWP2BQ6NUJ5 590 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 Q6ZSR9 355 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 ZNF248Q8NDW4 579 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 APOBEC4Q8WW27 367 aaKnown RBP3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 P2RX5Q93086 422 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 ST6GALNAC6Q969X2 333 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 AZIN2Q96A70 460 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 GBP5Q96PP8 586 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 INTS14Q96SY0 518 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 FERMT1Q9BQL6 677 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 BARHL1Q9BZE3 327 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 WDR13Q9H1Z4 485 aa3.95□□□□□ -1.78
HMGB3P6-201ENST00000444896 LMAN1LQ9HAT1 526 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms