RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 KHDRBS2Q5VWX1 349 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 GLYATQ6IB77 296 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DUS1LQ6P1R4 473 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 KLHL35Q6PF15 583 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 IZUMO2Q6UXV1 221 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DNAJC14Q6Y2X3 702 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 GCNT7Q6ZNI0 430 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 COMMD6Q7Z4G1 85 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 AMIGO1Q86WK6 493 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 UBALD2Q8IYN6 164 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 C2orf73Q8N5S3 287 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 KRTCAP2Q8N6L1 136 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OR8J2Q8NGG1 315 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZFP28Q8NHY6 868 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SDCCAG3Q96C92 435 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SLC39A3Q9BRY0 314 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ASPSCR1Q9BZE9 553 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 REXO4Q9GZR2 422 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 COPS7BQ9H9Q2 264 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRDM8Q9NQV8 689 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 GIMAP4Q9NUV9 329 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 POT1Q9NUX5 634 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DNAAF2Q9NVR5 837 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 WSB2Q9NYS7 404 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 DOLKQ9UPQ8 538 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 AURKCQ9UQB9 309 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 COLQQ9Y215 455 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 AP1M2Q9Y6Q5 423 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 KRT87PA6NCN2 255 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM170BA6NMN3 283 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZCCHC18P0CG32 403 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 THEGLP0DJG4 465 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 AHRP35869 848 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 RGS19P49795 217 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ANXA11P50995 505 aaKnown RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 MAPK12P53778 367 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PLIN5Q00G26 463 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 MLLT1Q03111 559 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 HEPACAMQ14CZ8 416 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ALG11Q2TAA5 492 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PRRT3Q5FWE3 981 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 RABL3Q5HYI8 236 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OR4F3Q6IEY1 312 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 DLEU7Q6UYE1 221 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZNF621Q6ZSS3 439 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CAMKMTQ7Z624 323 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 TAF8Q7Z7C8 310 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 SLC9B2Q86UD5 537 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM129CQ86XR2 697 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 EID3Q8N140 333 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ZNF655Q8N720 491 aaPredicted RBP5.79□□□□□ -1.48
VPS50-205ENST00000441602 FAM156AQ8NDB6 213 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 BMFQ96LC9 184 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 CCDC115Q96NT0 180 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 BTBD9Q96Q07 612 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 PCDHAC1Q9H158 963 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 OR51B5Q9H339 312 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 BAG5Q9UL15 447 aa5.79□□□□□ -1.48
VPS50-205ENST00000441602 ASPDHA6ND91 283 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 MAP3K13O43283 966 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SH3BP5O60239 455 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 DFNA5O60443 496 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 CD72P21854 359 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SSR2P43308 183 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 ZFP36L2P47974 494 aaKnown RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 HKDC1Q2TB90 917 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SLC30A9Q6PML9 568 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 ADHFE1Q8IWW8 467 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SPEM1Q8N4L4 309 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 CAMKK1Q8N5S9 505 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 C16orf78Q8WTQ4 265 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 TSACCQ96A04 125 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 EME1Q96AY2 570 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 PDXPQ96GD0 296 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SLC45A3Q96JT2 553 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 RNF145Q96MT1 663 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 CDX2Q99626 313 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 CPPED1Q9BRF8 314 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 MS4A8Q9BY19 250 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 XKR8Q9H6D3 395 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 C6orf106Q9H6K1 298 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 CCM2LQ9NUG4 571 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 ARMC1Q9NVT9 282 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 EGFL7Q9UHF1 273 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 RPS6KA6Q9UK32 745 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 ZFC3H1O60293 1989 aaKnown RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 A0A1W2PPC4 97 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 TMEM247A6NEH6 219 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 H0YJX3 145 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 H7BY64 318 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 RNASET2O00584 256 aaKnown RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 TXNDC9O14530 226 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 SH3BGRLO75368 114 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 DEAF1O75398 565 aaPredicted RBP5.78□□□□□ -1.48
VPS50-205ENST00000441602 LDLRP01130 860 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 CD1EP15812 388 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 ATP6V1B2P21281 511 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 TACR1P25103 407 aa5.78□□□□□ -1.48
VPS50-205ENST00000441602 CD27P26842 260 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms