RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ARHGAP24Q8N264 748 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 ZADH2Q8N4Q0 377 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 CLEC1AQ8NC01 280 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 ST6GALNAC3Q8NDV1 305 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 LCN9Q8WX39 176 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 NSL1Q96IY1 281 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 CCT7Q99832 543 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 FAM118BQ9BPY3 351 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 NEURL2Q9BR09 285 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 TRIM55Q9BYV6 548 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 KLHL4Q9C0H6 718 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 ARMC7Q9H6L4 198 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 FBXO6Q9NRD1 293 aaPredicted RBP5.79□□□□□ -1.48
PTPRR-204ENST00000440835 IMP3Q9NV31 184 aaKnown RBP5.79□□□□□ -1.48
PTPRR-204ENST00000440835 ZDHHC3Q9NYG2 299 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 OR6C2Q9NZP2 312 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 KLHL8Q9P2G9 620 aaPredicted RBP5.79□□□□□ -1.48
PTPRR-204ENST00000440835 DCTN4Q9UJW0 460 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 GTF2A1LQ9UNN4 478 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 B3GNT3Q9Y2A9 372 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 NOX1Q9Y5S8 564 aa5.79□□□□□ -1.48
PTPRR-204ENST00000440835 C15orf38-AP3S2A0A0A6YYH1 394 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 TRBV5-4A0A0C4DH59 114 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 MYOCOSA0A1B0GUC4 107 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FUOMA2VDF0 154 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 K7EM74 188 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 GAPDHSO14556 408 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 SRP72O76094 671 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZWINTO95229 277 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 TIAF1O95411 115 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PRAMEF1O95521 474 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PDGFAP04085 211 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ATP1B2P14415 290 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 NFKB1P19838 968 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FDXRP22570 491 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CD68P34810 354 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PGM1P36871 562 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FOLR3P41439 243 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 TSFMP43897 325 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CPA2P48052 419 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ARCN1P48444 511 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ENTPD1P49961 510 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RAP1GDS1P52306 607 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CTSCP53634 463 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 BASP1P80723 227 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 BTKQ06187 659 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 AIMP2Q13155 320 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 NFE2L1Q14494 772 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZNF789Q5FWF6 425 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZNF648Q5T619 568 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 IGFL2Q6UWQ7 119 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FAM151BQ6UXP7 276 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RANBP10Q6VN20 620 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RGS9BPQ6ZS82 235 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ARPINQ7Z6K5 226 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 LRRC6Q86X45 466 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PDIK1LQ8N165 341 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 NXPE1Q8N323 547 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 SLC25A41Q8N5S1 370 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZBTB2Q8N680 514 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RBMXL3Q8N7X1 1067 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FAM71DQ8N9W8 422 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 OR2Y1Q8NGV0 311 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PPP4R1Q8TF05 950 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PTERQ96BW5 349 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ELMO2Q96JJ3 720 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 C5orf34Q96MH7 638 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PWWP2AQ96N64 755 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 COPS8Q99627 209 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CENPOQ9BU64 300 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 LIN28AQ9H9Z2 209 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 FANCFQ9NPI8 374 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ATP13A2Q9NQ11 1180 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 INTS7Q9NVH2 962 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 LGALS13Q9UHV8 139 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RIMKLBQ9ULI2 386 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 NEU2Q9Y3R4 380 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 TMEM150CB9EJG8 249 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 H3BSA7 217 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 AP3B1O00203 1094 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 HAUS5O94927 633 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CLPTM1O96005 669 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 MT-CYBP00156 380 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 LDLRP01130 860 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RPN2P04844 631 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ITGAXP20702 1163 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PRDX3P30048 256 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RPL22P35268 128 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ADRA1AP35348 466 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 DCDP81605 110 aaKnown RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 CDK16Q00536 496 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 LRRC74AQ0VAA2 488 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ASPHQ12797 758 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 KIR2DS3Q14952 304 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 GPR19Q15760 415 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 PDK4Q16654 411 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 HIF1AQ16665 826 aa5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 ZNF658BQ4V348 819 aaPredicted RBP5.78□□□□□ -1.48
PTPRR-204ENST00000440835 RNASEH2BQ5TBB1 312 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms