RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 DET1Q7L5Y6 550 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 TICAM2Q86XR7 235 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 MARCH9Q86YJ5 346 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 CEP57L1Q8IYX8 460 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 KIRREL3Q8IZU9 778 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 MAPKAPK5-AS1Q8N8E1 139 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PI4KAP1Q8N8J0 262 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 USP32Q8NFA0 1604 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 OR6J1Q8NGC5 347 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 RNF128Q8TEB7 428 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ROBO4Q8WZ75 1007 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PXDNQ92626 1479 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SPDL1Q96EA4 605 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SFXN2Q96NB2 322 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 RAB3IPQ96QF0 476 aaPredicted RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SPAG5Q96R06 1193 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 OLFM1Q99784 485 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 NUP85Q9BW27 656 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ARRDC1-AS1Q9H2J1 176 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PTPN23Q9H3S7 1636 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 OPA3Q9H6K4 179 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 PFDN4Q9NQP4 134 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SDR39U1Q9NRG7 319 aaPredicted RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 SPHK1Q9NYA1 384 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 ABT1Q9ULW3 272 aaKnown RBP2.55□□□□□ -2
HMGB1P31-201ENST00000437242 RIMS2Q9UQ26 1411 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 CEP350Q5VT06 3117 aa2.55□□□□□ -2
HMGB1P31-201ENST00000437242 CHD4Q14839 1912 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 THSD7AQ9UPZ6 1657 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 C1orf167Q5SNV9 1468 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ARHGAP31Q2M1Z3 1444 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 CEP162Q5TB80 1403 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 METP08581 1390 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 PLEKHG1Q9ULL1 1385 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 SOS1Q07889 1333 aaPredicted RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 A0A1W2PPM1 405 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 HYKKA2RU49 373 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 URADA6NGE7 173 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 MPTX1A8MV57 137 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 CLDN4O14493 209 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 TBCAO75347 108 aaKnown RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 TADA2AO75478 443 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 WDPCPO95876 746 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 SCG2P13521 617 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ACHEP22303 614 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ALDH3A2P51648 485 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 PDX1P52945 283 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ZFP36L1Q07352 338 aaKnown RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 TNIP1Q15025 636 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 VWC2Q2TAL6 325 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 KLHL26Q53HC5 615 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 C6orf163Q5TEZ5 329 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 LYSMD4Q5XG99 296 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 KRT39Q6A163 491 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 NUDT13Q86X67 352 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 MFN1Q8IWA4 741 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 THNSL1Q8IYQ7 743 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 NKAIN3Q8N8D7 197 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 TRIML1Q8N9V2 468 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 RFT1Q96AA3 541 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 MOB3AQ96BX8 217 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 DHX58Q96C10 678 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 SLC45A3Q96JT2 553 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 LINC00615Q96LM1 132 aaPredicted RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 RMDN2Q96LZ7 410 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ZMAT2Q96NC0 199 aaKnown RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 NAA11Q9BSU3 229 aaPredicted RBP2.54□□□□□ -2
HMGB1P31-201ENST00000437242 VN1R1Q9GZP7 353 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 TBC1D17Q9HA65 648 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 OSER1Q9NX31 292 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 ANAPC5Q9UJX4 755 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 UTRNP46939 3433 aa2.54□□□□□ -2
HMGB1P31-201ENST00000437242 SLIT2O94813 1529 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 LMTK2Q8IWU2 1503 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 DUOX2Q9NRD8 1548 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 ADGRL3Q9HAR2 1447 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 TRIM77I1YAP6 450 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 GAPDHSO14556 408 aaPredicted RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MEIS2O14770 477 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 SPRY1O43609 319 aaPredicted RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 CELF2O95319 508 aaKnown RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 IGHV2-70P01814 119 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 PTAFRP25105 342 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 HNRNPKP61978 463 aaKnown RBP eCLIP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MAT1AQ00266 395 aaKnown RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 RBPJQ06330 500 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 FAM166AQ6J272 317 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MFSD12Q6NUT3 480 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 KCNMB4Q86W47 210 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 COMMD2Q86X83 199 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 VSIG1Q86XK7 387 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 FAM114A1Q8IWE2 563 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 FGFRL1Q8N441 504 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 AQP11Q8NBQ7 271 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 CAMKVQ8NCB2 501 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 NUP37Q8NFH4 326 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 GPRC5AQ8NFJ5 357 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 OR5M8Q8NGP6 311 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 OR6S1Q8NH40 331 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms