RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 TMEM184CQ9NVA4 438 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RAPGEFL1Q9UHV5 662 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 TMEM229AB2RXF0 380 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 KPNA4O00629 521 aaPredicted RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 PCDH7O60245 1069 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 GCM2O75603 506 aaPredicted RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 LEFTY1O75610 366 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 OPN1SWP03999 348 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 GBAP04062 536 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PABPC1P11940 636 aaKnown RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 IDSP22304 550 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 VIPR1P32241 457 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RECQLP46063 649 aaPredicted RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 DEFB103AP81534 67 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 IFITM3Q01628 133 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 FPGSQ05932 587 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PRSS48Q7RTY5 328 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 FAM124AQ86V42 546 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RBM12BQ8IXT5 1001 aaKnown RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 CPA6Q8N4T0 437 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 RASGEF1AQ8N9B8 481 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 VPS37AQ8NEZ2 397 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 OR4K1Q8NGD4 311 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 OR4A15Q8NGL6 344 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 DYNC2LI1Q8TCX1 351 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 DNASE1L2Q92874 299 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 TMEM159Q96B96 161 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ZNF689Q96CS4 500 aaPredicted RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 LGALS12Q96DT0 336 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 HHIPL1Q96JK4 782 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PKP4Q99569 1192 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 CCNB1IP1Q9NPC3 277 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PNMA8BQ9ULN7 279 aaPredicted RBP11.38□□□□□ -0.59
CD44-209ENST00000433892 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.38□□□□□ -0.59
CD44-209ENST00000433892 TESMINQ9Y4I5 508 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 PCDHGA6Q9Y5G7 932 aa11.38□□□□□ -0.59
CD44-209ENST00000433892 CDH23Q9H251 3354 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 AP2A2O94973 939 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CTSAP10619 480 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CD36P16671 472 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 ZNF30P17039 623 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 IMPA1P29218 277 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 PDHA2P29803 388 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 PBLDP30039 288 aaPredicted RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 HNF4AP41235 474 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CCR2P41597 374 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CRATP43155 626 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 C21orf58P58505 322 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 RPS13P62277 151 aaKnown RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 ZNF33BQ06732 778 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 OXA1LQ15070 435 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 INAQ16352 499 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 ARSIQ5FYB1 569 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 COX20Q5RI15 118 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 BRAT1Q6PJG6 821 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 ZNF852Q6ZMS4 543 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 TSEN54Q7Z6J9 526 aaKnown RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 LMNTD1Q8N9Z9 388 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CYB5D2Q8WUJ1 264 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 ATL1Q8WXF7 558 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 NEIL2Q969S2 332 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 TAMM41Q96BW9 452 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 VWCEQ96DN2 955 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 DEFB118Q96PH6 123 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 EPYCQ99645 322 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 PITX2Q99697 317 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 DOHHQ9BU89 302 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 MTG2Q9H4K7 406 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 BRF2Q9HAW0 419 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 AMBNQ9NP70 447 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 HCFC1R1Q9NWW0 138 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 BTNL2Q9UIR0 455 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 TTC34A8MYJ7 566 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CATP04040 527 aaKnown RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 C8AP07357 584 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CYP2A6P11509 494 aaPredicted RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 BMP4P12644 408 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 ETFAP13804 333 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 C21orf33P30042 268 aaPredicted RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 ASMTP46597 345 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 OR1E2P47887 323 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 SERPINB10P48595 397 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 MVKQ03426 396 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CBX3Q13185 183 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 TSTA3Q13630 321 aaPredicted RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 SYT16Q17RD7 645 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 HENMT1Q5T8I9 393 aaKnown RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 FAM43BQ6ZT52 329 aaPredicted RBP11.37□□□□□ -0.59
CD44-209ENST00000433892 ADIPOR2Q86V24 386 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 P3H2Q8IVL5 708 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 CHTF18Q8WVB6 975 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 S100ZQ8WXG8 99 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 STARD8Q92502 1023 aa11.37□□□□□ -0.59
CD44-209ENST00000433892 HRASLS5Q96KN8 279 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms