RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GGPS1O95749 300 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 THY1P04216 161 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 ZNF19P17023 458 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 AOC1P19801 751 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 CPT2P23786 658 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 CD27P26842 260 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 OAS2P29728 719 aaKnown RBP2.68□□□□□ -1.98
PTPN4-205ENST00000433888 VAMP7P51809 220 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 AIMP1Q12904 312 aaKnown RBP2.68□□□□□ -1.98
PTPN4-205ENST00000433888 SGCGQ13326 291 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 LETM2Q2VYF4 491 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 MCMDC2Q4G0Z9 681 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 KRBOX4Q5JUW0 171 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 ERMARDQ5T6L9 678 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 FCRLAQ7L513 359 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 RNF130Q86XS8 419 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 OR4K1Q8NGD4 311 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 FAM71F1Q96KD3 344 aaPredicted RBP2.68□□□□□ -1.98
PTPN4-205ENST00000433888 SFXN2Q96NB2 322 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 ZMYND12Q9H0C1 365 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 MYNNQ9NPC7 610 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 BAIAP2L1Q9UHR4 511 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 ELF5Q9UKW6 265 aaPredicted RBP2.68□□□□□ -1.98
PTPN4-205ENST00000433888 CHKBQ9Y259 395 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 SELENOKQ9Y6D0 94 aa2.68□□□□□ -1.98
PTPN4-205ENST00000433888 FAM220BPB1ANY3 271 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 NR2F1P10589 423 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 FDPSP14324 419 aaKnown RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 SAT1P21673 171 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 MUTP22033 750 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 DNASE1P24855 282 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 MC5RP33032 325 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 PRKCIP41743 596 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 PCLAFQ15004 111 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 C6orf163Q5TEZ5 329 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 MFSD12Q6NUT3 480 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 RPAP2Q8IXW5 612 aaPredicted RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 ZNF713Q8N859 430 aaPredicted RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 C4orf32Q8N8J7 132 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 OR10S1Q8NGN2 331 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 GOT1L1Q8NHS2 421 aaPredicted RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 PIK3R3Q92569 461 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 PGAP3Q96FM1 320 aaPredicted RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 B3GALT6Q96L58 329 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 DNAI2Q9GZS0 605 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 GOLPH3LQ9H4A5 285 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 EGLN3Q9H6Z9 239 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 SLC35C2Q9NQQ7 365 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 CWC25Q9NXE8 425 aaPredicted RBP2.67□□□□□ -1.98
PTPN4-205ENST00000433888 IKZF3Q9UKT9 509 aa2.67□□□□□ -1.98
PTPN4-205ENST00000433888 SPATA31D1Q6ZQQ2 1576 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 FAM168BA1KXE4 195 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 TRIM49BA6NDI0 452 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 SURF4O15260 269 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 OGTO15294 1046 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 SPRY1O43609 319 aaPredicted RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 TBX10O75333 385 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 RENP00797 406 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 AZGP1P25311 298 aaKnown RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 CTNNA1P35221 906 aaKnown RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 CAPZA2P47755 286 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 NDST2P52849 883 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 MAPK12P53778 367 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 RFTN1Q14699 578 aaPredicted RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 NTRK2Q16620 822 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 KYNUQ16719 465 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 PLEKHS1Q5SXH7 462 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 HECTD3Q5T447 861 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 RSBN1Q5VWQ0 802 aaPredicted RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 OLFML2AQ68BL7 652 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 PRR27Q6MZM9 219 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 TMEM64Q6YI46 380 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 SLFN11Q7Z7L1 901 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 PRPF39Q86UA1 669 aaKnown RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 IQCA1Q86XH1 822 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 DNAAF5Q86Y56 855 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 HSCBQ8IWL3 235 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 NDUFAF2Q8N183 169 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 NKAIN3Q8N8D7 197 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 AVL9Q8NBF6 648 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 POGLUT1Q8NBL1 392 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 OR52B6Q8NGF0 335 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 OR4D10Q8NGI6 311 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 AGAP11Q8TF27 550 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 LPGAT1Q92604 370 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 SPACA9Q96E40 222 aaPredicted RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 SIPA1Q96FS4 1042 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 ADPGKQ9BRR6 497 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 YTHDF1Q9BYJ9 559 aaKnown RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 PANK2Q9BZ23 570 aa2.66□□□□□ -1.98
PTPN4-205ENST00000433888 CHCHD3Q9NX63 227 aaKnown RBP2.66□□□□□ -1.98
PTPN4-205ENST00000433888 GLTPD2A6NH11 291 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 ARHGEF33A8MVX0 844 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 CDX4O14627 284 aaPredicted RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 ATP5BP06576 529 aaKnown RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 IRF2P14316 349 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 STAT2P52630 851 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 NDUFV3P56181 108 aaKnown RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 DCDC1P59894 354 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms