RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 DUSP1P28562 367 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FCGR2BP31994 310 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 RORAP35398 523 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 HSD17B3P37058 310 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ETV5P41161 510 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 KCNJ4P48050 445 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SLC1A6P48664 564 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ANXA11P50995 505 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 JAK3P52333 1124 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ADPRHP54922 357 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MYL6P60660 151 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CSNK2A1P68400 391 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GSTO1P78417 241 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 DLK1P80370 383 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SORDQ00796 357 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SLC34A1Q06495 639 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 RASGEF1BQ0VAM2 473 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GNA13Q14344 377 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PCK2Q16822 640 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM119Q4V9L6 283 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 HIKESHIQ53FT3 197 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FAM76BQ5HYJ3 339 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF311Q5JNZ3 666 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 RABGAP1LQ5R372 815 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 IL23RQ5VWK5 629 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TTC23Q5W5X9 447 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 LYSMD4Q5XG99 296 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PLCXD3Q63HM9 321 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PRR27Q6MZM9 219 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CYB5D1Q6P9G0 228 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 Q6ZPB1 254 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 STXBP4Q6ZWJ1 553 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TRPM8Q7Z2W7 1104 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GRASPQ7Z6J2 395 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 LUZP2Q86TE4 346 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 YRDCQ86U90 279 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TBC1D26Q86UD7 250 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 VPS36Q86VN1 386 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ANKRD46Q86W74 232 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 LAS2Q8IYD9 372 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FAM47BQ8NA70 645 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 KIAA0895Q8NCT3 520 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CSNK2A3Q8NEV1 391 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CD300LFQ8TDQ1 290 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GLYATL2Q8WU03 294 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CHPT1Q8WUD6 406 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PIBF1Q8WXW3 757 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 EMG1Q92979 244 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM125Q96AQ2 219 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PINX1Q96BK5 328 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SPDL1Q96EA4 605 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 PTCD3Q96EY7 689 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 INPP4AQ96PE3 977 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SLITRK1Q96PX8 696 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FRG2BQ96QU4 278 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 OR1F2PQ96R84 312 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 C17orf62Q9BQA9 187 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 BPIFA3Q9BQP9 254 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 ACBD6Q9BR61 282 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM43Q9BTV4 400 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 IFT27Q9BW83 186 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 OSBPL10Q9BXB5 764 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 RNF26Q9BY78 433 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 FRMD8P1Q9BZ68 369 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CUEDC2Q9H467 287 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM185BQ9H7F4 350 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MED20Q9H944 212 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 UCK1Q9HA47 277 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SAP30LQ9HAJ7 183 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SGK2Q9HBY8 427 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MKKSQ9NPJ1 570 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MAN2C1Q9NTJ4 1040 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 MRPL22Q9NWU5 206 aaKnown RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 GRHL1Q9NZI5 618 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 HACD3Q9P035 362 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 NDUFA13Q9P0J0 144 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CCNL1Q9UK58 526 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-205ENST00000424674 STAP1Q9ULZ2 295 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 IFT52Q9Y366 437 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 SH3GLB1Q9Y371 365 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 CLIC4Q9Y696 253 aa3.53□□□□□ -1.84
SF3B1-205ENST00000424674 A0A087WUV0 522 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-205ENST00000424674 A0A0U1RRA0 63 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 A0A1W2PPQ1 181 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 A0A1W2PS29 197 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TMEM129A0AVI4 362 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 C1orf226A1L170 272 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 MYADML2A6NDP7 307 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TTC34A8MYJ7 566 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 H0YGN5 161 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ZNF197O14709 1029 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 MDM4O15151 490 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ZW10O43264 779 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 RNF13O43567 381 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 TRIAP1O43715 76 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 ACSL4O60488 711 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CDK14O94921 469 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 PIGNO95427 931 aa3.52□□□□□ -1.85
SF3B1-205ENST00000424674 CALCAP01258 141 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms